RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RIPOR3Q96MK2 946 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 ANKRD60Q9BZ19 345 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 SPRTNQ9H040 489 aaPredicted RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 DCSTAMPQ9H295 470 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 BRD9Q9H8M2 597 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 CACYBPQ9HB71 228 aaKnown RBP5.58□□□□□ -1.52
RFFL-202ENST00000394597 MID1IP1Q9NPA3 183 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 XPR1Q9UBH6 696 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 GMPPBQ9Y5P6 360 aa5.58□□□□□ -1.52
RFFL-202ENST00000394597 RP1L1Q8IWN7 2480 aaPredicted RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 PLXNB2O15031 1838 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 GLYATL1P3A0A0U1RQE8 302 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 FAM240BA0A1B0GVZ2 78 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 QSOX1O00391 747 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 CCL22O00626 93 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ZBTB14O43829 449 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 CST1P01037 141 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 APODP05090 189 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 RHOP08100 348 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ABCB1P08183 1280 aaPredicted RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 SPAM1P38567 509 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 NRIP1P48552 1158 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 RAB25P57735 213 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 SCN1BQ07699 218 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 CAMK2BQ13554 666 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 APOFQ13790 326 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 PPP1R3AQ16821 1122 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ZNF404Q494X3 552 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 DPY19L3Q6ZPD9 716 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ERMP1Q7Z2K6 904 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 LDB1Q86U70 411 aaPredicted RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 CHERPQ8IWX8 916 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 TRIM48Q8IWZ4 208 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 CHPFQ8IZ52 775 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 UNC5BQ8IZJ1 945 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 FAM109AQ8N4B1 249 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 TBC1D19Q8N5T2 526 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 PTGR2Q8N8N7 351 aaPredicted RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 DCAF4L2Q8NA75 395 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 OR52K2Q8NGK3 314 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 GFM1Q96RP9 751 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 COPS4Q9BT78 406 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 KIFC1Q9BW19 673 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 FUNDC2Q9BWH2 189 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 GATA5Q9BWX5 397 aaPredicted RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 TDRD1Q9BXT4 1180 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 SUCOQ9UBS9 1254 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 MRPS7Q9Y2R9 242 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 PCDHB1Q9Y5F3 818 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 MICAL3Q7RTP6 2002 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 SBF1O95248 1867 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 A0A1B0GTW7 788 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 WASH4PA8MWX3 477 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 G3V2T6 193 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 TNFRSF10BO14763 440 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 KIAA0355O15063 1070 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 RGS10O43665 173 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 FTH1P02794 183 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 PRNPP04156 253 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 NTRK1P04629 796 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 GPIP06744 558 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ZNF806P0C7X5 589 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 HNRNPLP14866 589 aaKnown RBP eCLIP5.57□□□□□ -1.52
RFFL-202ENST00000394597 IL7RP16871 459 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 OGNP20774 298 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 ELK4P28324 431 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 HLCSP50747 726 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 CYP4F2P78329 520 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 CYP4F3Q08477 520 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 MBLAC2Q68D91 279 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ANGPTL8Q6UXH0 198 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 R3HCC1LQ7Z5L2 792 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 ADHFE1Q8IWW8 467 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ZFP90Q8TF47 636 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 HEXDCQ8WVB3 486 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 TIFAQ96CG3 184 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 OTUB2Q96DC9 234 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 IMP4Q96G21 291 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 HDHD2Q9H0R4 259 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 SMG9Q9H0W8 520 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 CCNB1IP1Q9NPC3 277 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 SLC35C2Q9NQQ7 365 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 POLR3BQ9NW08 1133 aaPredicted RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 TBX21Q9UL17 535 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 SNX7Q9UNH6 387 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 EIF3LQ9Y262 564 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 TRAF6Q9Y4K3 522 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ARL5AQ9Y689 179 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 KCNE2Q9Y6J6 123 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 DRGXA6NNA5 263 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ANKRD66B4E2M5 251 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 PLOD3O60568 738 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 TSPAN19P0C672 248 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ELFN1P0C7U0 828 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 IL7P13232 177 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 CYP4B1P13584 511 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 CD36P16671 472 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 EN2P19622 333 aaPredicted RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 GPR1P46091 355 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 SRP54P61011 504 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms