RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 IRGCQ6NXR0 463 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 TMEM207Q6UWW9 146 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 RAPH1Q70E73 1250 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 PIWIL4Q7Z3Z4 852 aaKnown RBP6.55□□□□□ -1.36
UBBP1-201ENST00000392399 TMPRSS9Q7Z410 1059 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 PRSS42Q7Z5A4 293 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 B3GNT8Q7Z7M8 397 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 BPHLQ86WA6 291 aaPredicted RBP6.55□□□□□ -1.36
UBBP1-201ENST00000392399 CEP97Q8IW35 865 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 FBXO39Q8N4B4 442 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 OR2L8Q8NGY9 312 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 ATL1Q8WXF7 558 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 KLHL6Q8WZ60 621 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 RSC1A1Q92681 617 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 CAVIN3Q969G5 261 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 MTBPQ96DY7 904 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 LINGO1Q96FE5 620 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 PKNOX2Q96KN3 472 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 UBXN10Q96LJ8 280 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 TGM7Q96PF1 710 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 PAFAH2Q99487 392 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 DHRS4Q9BTZ2 278 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 MENTQ9BUN1 341 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 PARD6BQ9BYG5 372 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 DERL2Q9GZP9 239 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 CHRNA10Q9GZZ6 450 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 SEMA6CQ9H3T2 930 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 ZNF768Q9H5H4 540 aaKnown RBP6.55□□□□□ -1.36
UBBP1-201ENST00000392399 POLR1BQ9H9Y6 1135 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 DKK4Q9UBT3 224 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 TSR3Q9UJK0 312 aaKnown RBP6.55□□□□□ -1.36
UBBP1-201ENST00000392399 TLK1Q9UKI8 766 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 KLK13Q9UKR3 277 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 POMT2Q9UKY4 750 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 ICKQ9UPZ9 632 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 ACOT9Q9Y305 439 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 CHD8Q9HCK8 2581 aa6.55□□□□□ -1.36
UBBP1-201ENST00000392399 AKAP13Q12802 2813 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 A0A087X1B8 175 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 IQANK1A0A1B0GTG1 560 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 GSAPA4D1B5 854 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 FAM149AA5PLN7 773 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ARHGEF33A8MVX0 844 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 B4E171 279 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TARM1B6A8C7 271 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 POC1B-GALNT4F8VUJ3 575 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 BTN3A3O00478 584 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 BTN3A1O00481 513 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 CASC3O15234 703 aaKnown RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 PRICKLE3O43900 615 aaPredicted RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 FAM155BO75949 473 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 WISP3O95389 354 aaPredicted RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ZBTB11O95625 1053 aaPredicted RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TOP3BO95985 862 aaKnown RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 C2P06681 752 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 MSL3P1P0C860 447 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 JMJD7P0C870 316 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 CCDC166P0CW27 439 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 COL6A2P12110 1019 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 NELFEP18615 380 aaKnown RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 CDH3P22223 829 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 CCND1P24385 295 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 RBMS1P29558 406 aaKnown RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TYK2P29597 1187 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 OAS2P29728 719 aaKnown RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TSPAN7P41732 249 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ARL4DP49703 201 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 HNMTP50135 292 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 SERPINB8P50452 374 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 CSRP3P50461 194 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 PNLIPRP1P54315 467 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 GFERP55789 205 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 CLDN6P56747 220 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 RAB15P59190 212 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ERVPABLB-1P60509 514 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 HSD11B2P80365 405 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 CDKL1Q00532 357 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 MC2RQ01718 297 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ACY1Q03154 408 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 EFTUD2Q15029 972 aaKnown RBP eCLIP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 SLC5A12Q1EHB4 618 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 FAM83EQ2M2I3 478 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TAF1BQ53T94 588 aaPredicted RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TMTC4Q5T4D3 741 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TMEM164Q5U3C3 297 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 FBXO38Q6PIJ6 1188 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 SPESP1Q6UW49 350 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TIFABQ6ZNK6 161 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ADAMTSL2Q86TH1 951 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TBC1D1Q86TI0 1168 aaPredicted RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 LCA5Q86VQ0 697 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 TDRPQ86YL5 185 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 LMNTD1Q8N9Z9 388 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 LINC01555Q8NAE3 123 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 UHMK1Q8TAS1 419 aaKnown RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 AENQ8WTP8 325 aaKnown RBP6.54□□□□□ -1.36
UBBP1-201ENST00000392399 DCAKDQ8WVC6 231 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 ANKRD49Q8WVL7 239 aa6.54□□□□□ -1.36
UBBP1-201ENST00000392399 UBLCP1Q8WVY7 318 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms