RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 LMNTD1Q8N9Z9 388 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 C2CD4AQ8NCU7 369 aaPredicted RBP10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 CFAP61Q8NHU2 1237 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 GIMAP7Q8NHV1 300 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 DENND1AQ8TEH3 1009 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 KCNJ9Q92806 393 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 KIAA1143Q96AT1 154 aaPredicted RBP10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 LRRC39Q96DD0 335 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 RNF31Q96EP0 1072 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 TCTN2Q96GX1 697 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 PWWP2AQ96N64 755 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 TRIM51Q9BSJ1 452 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 FAM117AQ9C073 453 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 SEMA4CQ9C0C4 833 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 FBXO6Q9NRD1 293 aaPredicted RBP10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 SOHLH2Q9NX45 425 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 RUVBL2Q9Y230 463 aaKnown RBP10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 DHRS7Q9Y394 339 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 KLK4Q9Y5K2 254 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 MRFAP1Q9Y605 127 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 COMMD10Q9Y6G5 202 aa10.99□□□□□ -0.65
IGHV4-28-201ENST00000390612 A0A1W2PPV9 198 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 C21orf140B9A014 251 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 E7ESA3 106 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 GFYI3L273 518 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 CPNE3O75131 537 aaKnown RBP10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 PSIP1O75475 530 aaKnown RBP10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 SCRG1O75711 98 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 FKBP9O95302 570 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 PRB1P04280 392 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 CAPN1P07384 714 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 CCNYL3P0C7X3 344 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 CHRM3P20309 590 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 DLSTP36957 453 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 CCNFP41002 786 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 RPL21P46778 160 aaKnown RBP10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 GCGRP47871 477 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 ITGA8P53708 1063 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 MPP1Q00013 466 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 CYP2A13Q16696 494 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 KLHL38Q2WGJ6 581 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 TAF1BQ53T94 588 aaPredicted RBP10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 PRAMEF17Q5VTA0 474 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 ZNF385CQ66K41 422 aaPredicted RBP10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 ZNF572Q7Z3I7 529 aaPredicted RBP10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 KCNMB4Q86W47 210 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 SPNS2Q8IVW8 549 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 DSELQ8IZU8 1212 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 PDIK1LQ8N165 341 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 ZNF843Q8N446 348 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 FBXO15Q8NCQ5 510 aaPredicted RBP10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 SPATA4Q8NEY3 305 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 CT55Q8WUE5 264 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 STARD8Q92502 1023 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 EXTL1Q92935 676 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 FAM136AQ96C01 138 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 MED8Q96G25 268 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 SNF8Q96H20 258 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 IL17FQ96PD4 163 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 KRT12Q99456 494 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 FAM167BQ9BTA0 163 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 AARSD1Q9BTE6 412 aaKnown RBP10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 RAB11FIP5Q9BXF6 653 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 KLHL25Q9H0H3 589 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 WDR70Q9NW82 654 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 SERTAD3Q9UJW9 196 aa10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 MRPS18BQ9Y676 258 aaKnown RBP10.98□□□□□ -0.65
IGHV4-28-201ENST00000390612 RP1L1Q8IWN7 2480 aaPredicted RBP10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 KRT87PA6NCN2 255 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 ARHGEF33A8MVX0 844 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 ISM1B1AKI9 464 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 TMEM150CB9EJG8 249 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 MYO1CO00159 1063 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 MEN1O00255 615 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 EIF3FO00303 357 aaPredicted RBP10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 AHSGP02765 367 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 MPC1LP0DKB6 136 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 ERVK-10P10266 1014 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 TCN2P20062 427 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 OAS2P29728 719 aaKnown RBP10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 ELK3P41970 407 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 BDKRB1P46663 353 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 MC1RQ01726 317 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 CDC20Q12834 499 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 DNASE1L3Q13609 305 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 LY6DQ14210 128 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 BBS9Q3SYG4 887 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 TEDDM1Q5T9Z0 273 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 LCN10Q6JVE6 187 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 FAM199XQ6PEV8 388 aaPredicted RBP10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 TTC23LQ6PF05 361 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 KIAA0408Q6ZU52 694 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 TMEM126BQ8IUX1 230 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 FAM20CQ8IXL6 584 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 OR2A1Q8NGT9 310 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 OR9A1PQ8NGU1 263 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 GSDMBQ8TAX9 411 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 CD200R1Q8TD46 325 aa10.97□□□□□ -0.65
IGHV4-28-201ENST00000390612 MAGEC3Q8TD91 643 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms