RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 NPM2Q86SE8 214 aaKnown RBP-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 LRRC49Q8IUZ0 686 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 ARHGAP12Q8IWW6 846 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 SUGP1Q8IWZ8 645 aaKnown RBP-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 PM20D2Q8IYS1 436 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 GPC2Q8N158 579 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 ZCCHC9Q8N567 271 aaKnown RBP-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 SLC5A8Q8N695 610 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 C1orf52Q8N6N3 182 aaKnown RBP-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 OR6T1Q8NGN1 323 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 PPP4R1Q8TF05 950 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 PCNPQ8WW12 178 aaKnown RBP-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 SLC22A18Q96BI1 424 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 C16orf74Q96GX8 76 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 SPAG5Q96R06 1193 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 SLC22A12Q96S37 553 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 NKX3-1Q99801 234 aaPredicted RBP-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 MYD88Q99836 296 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 HERC2P3Q9BVR0 1158 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 ULBP2Q9BZM5 246 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 CTDSP1Q9GZU7 261 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 THAP2Q9H0W7 228 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 GLT8D2Q9H1C3 349 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 CPVLQ9H3G5 476 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 TTC12Q9H892 705 aaPredicted RBP-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 BPIFA1Q9NP55 256 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 PNPLA8Q9NP80 782 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 TMLHEQ9NVH6 421 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 ABI3Q9P2A4 366 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 FRMD4AQ9P2Q2 1039 aaPredicted RBP-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 ZNF230Q9UIE0 474 aaPredicted RBP-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 CD207Q9UJ71 328 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 PIAS3Q9Y6X2 628 aa-0.77□□□□□ -2.53
TRAJ53-201ENST00000390485 NSD1Q96L73 2696 aaPredicted RBP-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 TRAV9-2A0A087WT02 112 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 CCDC189A1A4V9 331 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 RBMY1BA6NDE4 496 aaKnown RBP-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 RBMY1EA6NEQ0 496 aaKnown RBP-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 ZSCAN5CA6NGD5 496 aaPredicted RBP-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 C16orf90A8MZG2 172 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 PDHXO00330 501 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 GOLIM4O00461 696 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 HOXC11O43248 304 aaPredicted RBP-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 MGEA5O60502 916 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 SLC24A1O60721 1099 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 GLRA3O75311 464 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 AVILO75366 819 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 CDK2AP2O75956 126 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 SEMA4FO95754 770 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 H1F0P07305 194 aaKnown RBP-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 RBMY1DP0C7P1 496 aaKnown RBP-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 IGHV4-31P0DP07 118 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 SELEP16581 610 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 AOC1P19801 751 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 JAK1P23458 1154 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 TECP42680 631 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 RXRGP48443 463 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 IST1P53990 364 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 SRPXP78539 464 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 DHODHQ02127 395 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 TMEM44Q2T9K0 475 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 SLC25A53Q5H9E4 307 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 EMBQ6PCB8 327 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 SCARA5Q6ZMJ2 495 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 TGIF2LYQ8IUE0 185 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 SLC38A9Q8NBW4 561 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 HJURPQ8NCD3 748 aaPredicted RBP-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 OR5T2Q8NGG2 359 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 OR6F1Q8NGZ6 308 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 APOBEC4Q8WW27 367 aaKnown RBP-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 LRRC58Q96CX6 371 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 EGLN2Q96KS0 407 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 SGK494Q96LW2 274 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 SPIN2AQ99865 258 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 SPIN2BQ9BPZ2 258 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 USP44Q9H0E7 712 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 PNNQ9H307 717 aaKnown RBP-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 NPAP1Q9NZP6 1156 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 PDP2Q9P2J9 529 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 B3GAT1Q9P2W7 334 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 CYP46A1Q9Y6A2 500 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 CLCA3PQ9Y6N3 262 aa-0.78□□□□□ -2.53
TRAJ53-201ENST00000390485 COL22A1Q8NFW1 1626 aaPredicted RBP-0.78□□□□□ -2.54
TRAJ53-201ENST00000390485 A0A1B0GUA9 196 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 GSAPA4D1B5 854 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 PABPN1LA6NDY0 278 aaKnown RBP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 H0YAE9 185 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 J3QRE1 110 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 K7EQG2 157 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 M0QZ24 198 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 VCYO14598 125 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 TLX2O43763 284 aaPredicted RBP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 N4BP1O75113 896 aaKnown RBP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 MED6O75586 246 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 RNH1P13489 461 aaKnown RBP-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 MYOGP15173 224 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 PRKAR2BP31323 418 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 SERPINF1P36955 418 aa-0.79□□□□□ -2.54
TRAJ53-201ENST00000390485 CCR3P51677 355 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms