RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 NEK10Q6ZWH5 1172 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZNF614Q8N883 585 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 OR13J1Q8NGT2 312 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 POLR2J2Q9GZM3 115 aaKnown RBP12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 TIGARQ9NQ88 270 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 DNAJC11Q9NVH1 559 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ERVK-11Q9UQG0 969 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 A0A1W2PQ72 361 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 H0YC42 278 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 PAPSS2O95340 614 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ITGB1P05556 798 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 PRDX3P30048 256 aaKnown RBP12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 PTSQ03393 145 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ATAD3BQ5T9A4 648 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 SYCE2Q6PIF2 218 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 USP45Q70EL2 814 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 AP3S1Q92572 193 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 MMP27Q9H306 513 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 BRD9Q9H8M2 597 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 SGK2Q9HBY8 427 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 COMMD3Q9UBI1 195 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 CARD8Q9Y2G2 431 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 PCDHGB3Q9Y5G1 929 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 SESN1Q9Y6P5 492 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 FADS2P1A8MWK0 482 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 DCKP27707 260 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 HTR6P50406 440 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 BNC1Q01954 994 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 RAPSNQ13702 412 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ANGPT1Q15389 498 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 RNASE12Q5GAN4 147 aaKnown RBP12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ATXN7L2Q5T6C5 722 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ANXA8L1Q5VT79 327 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 RANBP10Q6VN20 620 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 MRPS31Q92665 395 aaKnown RBP12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 PPCDCQ96CD2 204 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 TRNT1Q96Q11 434 aaKnown RBP12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 DSN1Q9H410 356 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 TBC1D14Q9P2M4 693 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ING4Q9UNL4 249 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZNF232Q9UNY5 417 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 MAPRE3Q9UPY8 281 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 NPPAP01160 153 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 NAE1Q13564 534 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 LGI4Q8N135 537 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 CSGALNACT1Q8TDX6 532 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 HSH2DQ96JZ2 352 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ACAT2Q9BWD1 397 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 MAF1Q9H063 256 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 CLEC4AQ9UMR7 237 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 FCF1Q9Y324 198 aaKnown RBP12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 TRIM64CA6NLI5 447 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 CLDN11O75508 207 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 CCNDBP1O95273 360 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 CD1EP15812 388 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZNF157P51786 506 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 ATN1P54259 1190 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 MTA1Q13330 715 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 MZT2AQ6P582 158 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 USP30Q70CQ3 517 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 RAB42Q8N4Z0 105 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 GRPEL2Q8TAA5 225 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 IMP4Q96G21 291 aaKnown RBP12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 C8orf48Q96LL4 319 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 PHOX2BQ99453 314 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 IL12RB2Q99665 862 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 ATP13A3Q9H7F0 1226 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 MIOSQ9NXC5 875 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 KCTD5Q9NXV2 234 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 AHSPQ9NZD4 102 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 PADI3Q9ULW8 664 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 TMX2-CTNND1H3BSU7 103 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 VIPP01282 170 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 AKR1A1P14550 325 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 KCNE1P15382 129 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 SHMT2P34897 504 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 PPP5CP53041 499 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 SMAD3P84022 425 aaKnown RBP12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 GTDC1Q4AE62 458 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 CYBRD1Q53TN4 286 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 KCNE2Q9Y6J6 123 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 M0QX08 132 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 LCKP06239 509 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 PSKH1P11801 424 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 CD247P20963 164 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 INHBEP58166 350 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 ABHD18Q0P651 414 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 C16orf62Q7Z3J2 963 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 KHSRPQ92945 711 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 TADA1Q96BN2 335 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 REPS1Q96D71 796 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 ART5Q96L15 291 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 NKIRAS2Q9NYR9 191 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 SLC25A13Q9UJS0 675 aa12.85□□□□□ -0.35
TRAPPC9-201ENST00000389328 MYH14Q7Z406 1995 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 STX16O14662 325 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 SSNA1O43805 119 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 SEMA3DO95025 777 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 FPGSQ05932 587 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 SCAPQ12770 1279 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms