RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 ITLN1Q8WWA0 313 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 PSPC1Q8WXF1 523 aaKnown RBP0.42□□□□□ -2.34
SNORA40-201ENST00000388090 FRAT1Q92837 279 aaPredicted RBP0.42□□□□□ -2.34
SNORA40-201ENST00000388090 MAPKAP1Q9BPZ7 522 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 NUP85Q9BW27 656 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 C1QTNF1Q9BXJ1 281 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 DEFB126Q9BYW3 111 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 OCR1Q9BZK8 76 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 S1PR5Q9H228 398 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 CWC15Q9P013 229 aaKnown RBP0.42□□□□□ -2.34
SNORA40-201ENST00000388090 MTUS1Q9ULD2 1270 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 CLEC4EQ9ULY5 219 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 LRCH1Q9Y2L9 728 aa0.42□□□□□ -2.34
SNORA40-201ENST00000388090 ZFP37Q9Y6Q3 630 aaPredicted RBP0.42□□□□□ -2.34
SNORA40-201ENST00000388090 TENM3Q9P273 2699 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 IGKV1D-17A0A075B6S4 117 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 TMEM8BA6NDV4 472 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 H0YAE9 185 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 EPHB6O15197 1021 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 SMAD9O15198 467 aaKnown RBP0.41□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF861PO60384 105 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 CAND2O75155 1236 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 DDHD2O94830 711 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF44P15621 663 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 SELEP16581 610 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 GSK3BP49841 420 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 NDUFV3P56181 108 aaKnown RBP0.41□□□□□ -2.34
SNORA40-201ENST00000388090 TAS2R40P59535 323 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 GCNT1Q02742 428 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF33BQ06732 778 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 BLMHQ13867 455 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 HERC3Q15034 1050 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 LTB4RQ15722 352 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 NFIL3Q16649 462 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 ITPRIPL2Q3MIP1 535 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 LRIF1Q5T3J3 769 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 GARNL3Q5VVW2 1013 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 LEKR1Q6ZMV7 388 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 ZSCAN2Q7Z7L9 614 aaPredicted RBP0.41□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF589Q86UQ0 364 aaPredicted RBP0.41□□□□□ -2.34
SNORA40-201ENST00000388090 FTSJ3Q8IY81 847 aaKnown RBP0.41□□□□□ -2.34
SNORA40-201ENST00000388090 EID3Q8N140 333 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 ZNF540Q8NDQ6 660 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 OR10G7Q8NGN6 311 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 OR13J1Q8NGT2 312 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 GSDMBQ8TAX9 411 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 COG8Q96MW5 612 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 RANBP9Q96S59 729 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 CDX2Q99626 313 aaPredicted RBP0.41□□□□□ -2.34
SNORA40-201ENST00000388090 MTHFD2LQ9H903 347 aaPredicted RBP0.41□□□□□ -2.34
SNORA40-201ENST00000388090 STAU2Q9NUL3 570 aaKnown RBP eCLIP0.41□□□□□ -2.34
SNORA40-201ENST00000388090 MPP6Q9NZW5 540 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 FRMD4AQ9P2Q2 1039 aaPredicted RBP0.41□□□□□ -2.34
SNORA40-201ENST00000388090 INTS6Q9UL03 887 aaKnown RBP0.41□□□□□ -2.34
SNORA40-201ENST00000388090 HSF4Q9ULV5 492 aa0.41□□□□□ -2.34
SNORA40-201ENST00000388090 IGHV3-20A0A0C4DH32 117 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 PRSS51A0A1B0GVH4 220 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 ANKRD61A6NGH8 418 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 RPL37AP8A6NKH3 93 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 GUCY1B2O75343 617 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 ACHEP22303 614 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 CPOXP36551 454 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 ZBED6P86452 979 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 DHODHQ02127 395 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 EFR3AQ14156 821 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 NR1D2Q14995 579 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 SIX1Q15475 284 aaPredicted RBP0.4□□□□□ -2.35
SNORA40-201ENST00000388090 GSTA3Q16772 222 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 SOWAHCQ53LP3 525 aaPredicted RBP0.4□□□□□ -2.35
SNORA40-201ENST00000388090 MDH1BQ5I0G3 518 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 AGBL2Q5U5Z8 902 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 IL31Q6EBC2 164 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 ZNF544Q6NX49 715 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 TRIML1Q8N9V2 468 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 ZNF564Q8TBZ8 553 aaPredicted RBP0.4□□□□□ -2.35
SNORA40-201ENST00000388090 GTSF1Q8WW33 167 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 GTF3C6Q969F1 213 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 SIPA1Q96FS4 1042 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 RBM24Q9BX46 236 aaKnown RBP0.4□□□□□ -2.35
SNORA40-201ENST00000388090 LRRCC1Q9C099 1032 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 CACNG4Q9UBN1 327 aa0.4□□□□□ -2.35
SNORA40-201ENST00000388090 CNOT8Q9UFF9 292 aaKnown RBP0.4□□□□□ -2.35
SNORA40-201ENST00000388090 CNOT7Q9UIV1 285 aaKnown RBP0.4□□□□□ -2.35
SNORA40-201ENST00000388090 ZNF541Q9H0D2 1346 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 ANKRD62A6NC57 917 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 ARHGEF33A8MVX0 844 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 TLX2O43763 284 aaPredicted RBP0.39□□□□□ -2.35
SNORA40-201ENST00000388090 DAB1O75553 588 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 IGKV1-17P01599 117 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 RPL35AP18077 110 aaKnown RBP0.39□□□□□ -2.35
SNORA40-201ENST00000388090 AOC1P19801 751 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 GPX3P22352 226 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 AXLP30530 894 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 RPL21P46778 160 aaKnown RBP0.39□□□□□ -2.35
SNORA40-201ENST00000388090 MEOX2P50222 304 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 PPOXP50336 477 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 NEK3P51956 506 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 PDX1P52945 283 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 LBX1P52954 281 aa0.39□□□□□ -2.35
SNORA40-201ENST00000388090 ACY1Q03154 408 aa0.39□□□□□ -2.35
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