RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 GLOD4Q9HC38 313 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 MRPS30Q9NP92 439 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 ADAP2Q9NPF8 381 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 POLLQ9UGP5 575 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 MKLN1Q9UL63 735 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 A0A1B0GVT2 93 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ILVBLA1L0T0 632 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CARNS1A5YM72 827 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 YDJCA8MPS7 323 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 C2P06681 752 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 YES1P07947 543 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 SPARCP09486 303 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 NRLP54845 237 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CLCQ05315 142 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ENPP2Q13822 863 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 QPCTQ16769 361 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 PDE12Q6L8Q7 609 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 TMIEQ8NEW7 156 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 STYXQ8WUJ0 223 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CENPNQ96H22 339 aaPredicted RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 DGAT2Q96PD7 388 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TRMOQ9BU70 441 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 FBRSQ9HAH7 460 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ARHGEF4Q9NR80 690 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 GNG8Q9UK08 70 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 FZD1Q9UP38 647 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ZNF451Q9Y4E5 1061 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 PCDHGB2Q9Y5G2 931 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 ZNF521Q96K83 1311 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 SMIM30A4D0T7 59 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 DPPA5A6NC42 116 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 OR6C6A6NF89 314 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TRIM64CA6NLI5 447 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CAPN14A8MX76 684 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TMEM150CB9EJG8 249 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 MATN2O00339 956 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 MTPNP58546 118 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 MRPS5P82675 430 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 TUSC3Q13454 348 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TUBA3CQ13748 450 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 NOXRED1Q6NXP6 359 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TMEM220Q6QAJ8 160 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 NDRG1Q92597 394 aaKnown RBP5.76□□□□□ -1.49
RFX3-204ENST00000382004 COPS5Q92905 334 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 PORCNQ9H237 461 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 CRB1P82279 1406 aa5.76□□□□□ -1.49
RFX3-204ENST00000382004 TRAV6A0A075B6T7 132 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 TCAF2A6NFQ2 919 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 MATKP42679 507 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 NIPAL4Q0D2K0 466 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 RBM39Q14498 530 aaKnown RBP5.75□□□□□ -1.49
RFX3-204ENST00000382004 DCLRE1AQ6PJP8 1040 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 C7orf61Q8IZ16 206 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 PGAM4Q8N0Y7 254 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 CENPSQ8N2Z9 138 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 OXR1Q8N573 874 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 FAM156AQ8NDB6 213 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 IL4I1Q96RQ9 567 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 ZNF347Q96SE7 839 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 WACQ9BTA9 647 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 NMUR2Q9GZQ4 415 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 POLR2J3Q9H1A7 115 aaKnown RBP5.75□□□□□ -1.49
RFX3-204ENST00000382004 TBCCD1Q9NVR7 557 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 EIF2B4Q9UI10 523 aaKnown RBP5.75□□□□□ -1.49
RFX3-204ENST00000382004 A0A1B0GV50 99 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 HTR3EA5X5Y0 456 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 CTHP32929 405 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 MLLT3P42568 568 aaPredicted RBP5.75□□□□□ -1.49
RFX3-204ENST00000382004 PHF19Q5T6S3 580 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 LRRC66Q68CR7 880 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 PAOXQ6QHF9 649 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 MAP4K3Q8IVH8 894 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 MREGQ8N565 214 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 ATAD1Q8NBU5 361 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 HERVK_113Q902F9 699 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 ZBED6CLQ96FA7 236 aaPredicted RBP5.75□□□□□ -1.49
RFX3-204ENST00000382004 TMEM41AQ96HV5 264 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 OR5B12Q96R08 314 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 DUSP9Q99956 384 aaKnown RBP5.75□□□□□ -1.49
RFX3-204ENST00000382004 CERS4Q9HA82 394 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 AMBNQ9NP70 447 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 TUBG2Q9NRH3 451 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 NUDT4Q9NZJ9 180 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 HPSEQ9Y251 543 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 PLLPQ9Y342 182 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 FRMPD4Q14CM0 1322 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 A8MU76 341 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 BCAS1O75363 584 aaPredicted RBP5.75□□□□□ -1.49
RFX3-204ENST00000382004 OR4F21O95013 312 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 NTSR2O95665 410 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 GPIP06744 558 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 ZNF8P17098 575 aaPredicted RBP5.75□□□□□ -1.49
RFX3-204ENST00000382004 PER3P56645 1201 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 TAS2R40P59535 323 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 DNM1P34Q6PK57 102 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 SLC29A4Q7RTT9 530 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 ANKRD23Q86SG2 305 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 AGAP2Q99490 1192 aa5.75□□□□□ -1.49
RFX3-204ENST00000382004 NPLQ9BXD5 320 aaPredicted RBP5.75□□□□□ -1.49
RFX3-204ENST00000382004 NELFAQ9H3P2 528 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms