RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CYP2A13Q16696 494 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 ZXDCQ2QGD7 858 aaPredicted RBP12.27□□□□□ -0.45
SMN1-202ENST00000380707 KLC3Q6P597 504 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 DHRS13Q6UX07 377 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 FRA10AC1Q70Z53 315 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 GPSM1Q86YR5 675 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 SRRM1Q8IYB3 904 aaKnown RBP12.27□□□□□ -0.45
SMN1-202ENST00000380707 PPFIBP2Q8ND30 876 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 OR2L8Q8NGY9 312 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 RHEBL1Q8TAI7 183 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 STAG3L4Q8TBR4 150 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 HIST1H2AHQ96KK5 128 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 ATOH8Q96SQ7 321 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 HIST1H2AJQ99878 128 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 H2AFJQ9BTM1 129 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 TRIM54Q9BYV2 358 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 EPB41L1Q9H4G0 881 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 SYNDIG1Q9H7V2 258 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 ZNF446Q9NWS9 450 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 SPHK1Q9NYA1 384 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 TMEM9Q9P0T7 183 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 STOX2Q9P2F5 926 aaPredicted RBP12.27□□□□□ -0.45
SMN1-202ENST00000380707 LNPEPQ9UIQ6 1025 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 RNF112Q9ULX5 631 aa12.27□□□□□ -0.45
SMN1-202ENST00000380707 ANKRD12Q6UB98 2062 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 FAM221BA6H8Z2 402 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 NCF1BA6NI72 391 aaPredicted RBP12.26□□□□□ -0.45
SMN1-202ENST00000380707 NCF1CA8MVU1 366 aaPredicted RBP12.26□□□□□ -0.45
SMN1-202ENST00000380707 E7ENX8 843 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 KERAO60938 352 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 SASH3O75995 380 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 CPNE6O95741 557 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 CHRM5P08912 532 aaPredicted RBP12.26□□□□□ -0.45
SMN1-202ENST00000380707 MYZAPP0CAP1 466 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 NCF1P14598 390 aaPredicted RBP12.26□□□□□ -0.45
SMN1-202ENST00000380707 CREB1P16220 341 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 MPSTP25325 297 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 PEBP1P30086 187 aaKnown RBP12.26□□□□□ -0.45
SMN1-202ENST00000380707 PNLIPRP1P54315 467 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 GFERP55789 205 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 INSM1Q01101 510 aaPredicted RBP12.26□□□□□ -0.45
SMN1-202ENST00000380707 TAP2Q03519 686 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 ARHGAP19Q14CB8 494 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 TSNAXIP1Q2TAA8 658 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 TNFAIP8L3Q5GJ75 292 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 TECRLQ5HYJ1 363 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 ANKS6Q68DC2 871 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 KLHL35Q6PF15 583 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 WDR74Q6RFH5 385 aaPredicted RBP12.26□□□□□ -0.45
SMN1-202ENST00000380707 ZNF574Q6ZN55 896 aaPredicted RBP12.26□□□□□ -0.45
SMN1-202ENST00000380707 CDHR3Q6ZTQ4 885 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 CROCCP2Q86T23 111 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 TAX1BP1Q86VP1 789 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 OOSP2Q86WS3 158 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 LRRC56Q8IYG6 542 aaPredicted RBP12.26□□□□□ -0.45
SMN1-202ENST00000380707 TMEM151AQ8N4L1 468 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 HMGCLL1Q8TB92 370 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 PGM2Q96G03 612 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 GFM1Q96RP9 751 aaKnown RBP12.26□□□□□ -0.45
SMN1-202ENST00000380707 RUFY1Q96T51 708 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 RAB11FIP5Q9BXF6 653 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 TWSG1Q9GZX9 223 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 VIPAS39Q9H9C1 493 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 TMEM216Q9P0N5 145 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 SPATA7Q9P0W8 599 aa12.26□□□□□ -0.45
SMN1-202ENST00000380707 APOBEC2Q9Y235 224 aaKnown RBP12.26□□□□□ -0.45
SMN1-202ENST00000380707 SPTBN2O15020 2390 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 GSAPA4D1B5 854 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 PABPN1LA6NDY0 278 aaKnown RBP12.25□□□□□ -0.45
SMN1-202ENST00000380707 D6RAR5 112 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 UBXN8O00124 270 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 MAP2K7O14733 419 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 CAPN5O15484 640 aaPredicted RBP12.25□□□□□ -0.45
SMN1-202ENST00000380707 GSTA1P08263 222 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 SBK3P0C264 359 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 MTHFD2P13995 350 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 HSD17B2P37059 387 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 CDKL1Q00532 357 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 SPIDRQ14159 915 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 IRGCQ6NXR0 463 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 C16orf46Q6P387 395 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 AGTRAPQ6RW13 159 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 SUSD1Q6UWL2 747 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 LCA5Q86VQ0 697 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 SYTL1Q8IYJ3 562 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 RAB42Q8N4Z0 105 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 EXT2Q93063 718 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 RHBDF1Q96CC6 855 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 FBXL8Q96CD0 374 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 SCYL1Q96KG9 808 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 TSNARE1Q96NA8 513 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 TGM7Q96PF1 710 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 RAB33BQ9H082 229 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 ATG10Q9H0Y0 220 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 CPSF2Q9P2I0 782 aaKnown RBP12.25□□□□□ -0.45
SMN1-202ENST00000380707 XPR1Q9UBH6 696 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 EPHA6Q9UF33 1036 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 DCDC2Q9UHG0 476 aa12.25□□□□□ -0.45
SMN1-202ENST00000380707 AKAP13Q12802 2813 aa12.24□□□□□ -0.45
SMN1-202ENST00000380707 A0A1W2PPV9 198 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms