RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 VARS2Q5ST30 1063 aaKnown RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 GPR153Q6NV75 609 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 AGMOQ6ZNB7 445 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 KRT77Q7Z794 578 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 OAFQ86UD1 273 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 PHYKPLQ8IUZ5 450 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 ZNF513Q8N8E2 541 aaPredicted RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 OR13C4Q8NGS5 318 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 PEX13Q92968 403 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 ACDQ96AP0 544 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 TSGA13Q96PP4 275 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 DERL2Q9GZP9 239 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 MED28Q9H204 178 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 MINDY3Q9H8M7 445 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 CCDC177Q9NQR7 707 aaPredicted RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 DNAAF2Q9NVR5 837 aaKnown RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 THUMPD1Q9NXG2 353 aaKnown RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 CFAP97Q9P2B7 532 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 GALPQ9UBC7 116 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 MAP4K5Q9Y4K4 846 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 PSAT1Q9Y617 370 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 ILVBLA1L0T0 632 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 CLIC1O00299 241 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 TOR1BO14657 336 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 NME6O75414 186 aaPredicted RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 PSIP1O75475 530 aaKnown RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 KHDRBS3O75525 346 aaKnown RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 TSPAN9O75954 239 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 HLA-DQA2P01906 255 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 ALDOAP04075 364 aaKnown RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 EDNRBP24530 442 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 RGS8P57771 180 aaPredicted RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 AP3S2P59780 193 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 RHAGQ02094 409 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 EMX2Q04743 252 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 SLC10A7Q0GE19 358 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 GRIK2Q13002 908 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 C1orf220Q5T0J3 134 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 CHST15Q7LFX5 561 aaPredicted RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 TRIM74Q86UV6 250 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 TRIM73Q86UV7 250 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 CHCHD4Q8N4Q1 142 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 C2CD4AQ8NCU7 369 aaPredicted RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 RERGQ96A58 199 aaPredicted RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 BIRC7Q96CA5 298 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 XYLT2Q9H1B5 865 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 DCSTAMPQ9H295 470 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 WBP1LQ9NX94 342 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 FBXO10Q9UK96 956 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 TMED5Q9Y3A6 229 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 MRPS23Q9Y3D9 190 aaKnown RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 GMEB1Q9Y692 573 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 FABP12A6NFH5 140 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 ZW10O43264 779 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 RORCP51449 518 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 CCNIQ14094 377 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 FUT10Q6P4F1 479 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 LINGO4Q6UY18 593 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 CCDC36Q8IYA8 594 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 SLC43A3Q8NBI5 491 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 PIGXQ8TBF5 258 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 EMID1Q96A84 441 aaPredicted RBP8.21□□□□□ -1.09
VPS36-201ENST00000378060 RAD51AP1Q96B01 352 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 FIZ1Q96SL8 496 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 TUBA1CQ9BQE3 449 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 SLC39A3Q9BRY0 314 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 TTLL2Q9BWV7 592 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 POLR2J2Q9GZM3 115 aaKnown RBP8.21□□□□□ -1.09
VPS36-201ENST00000378060 RPF2Q9H7B2 306 aaKnown RBP8.21□□□□□ -1.09
VPS36-201ENST00000378060 TMEM165Q9HC07 324 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 ABCB9Q9NP78 766 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 POFUT2Q9Y2G5 429 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 DENRO43583 198 aaKnown RBP8.21□□□□□ -1.09
VPS36-201ENST00000378060 SNX4O95219 450 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 OAS1P00973 400 aaKnown RBP8.21□□□□□ -1.09
VPS36-201ENST00000378060 S100A9P06702 114 aaKnown RBP8.21□□□□□ -1.09
VPS36-201ENST00000378060 HTR1BP28222 390 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 GJA8P48165 433 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 STARP49675 285 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 TMBIM6P55061 237 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 ADAM17P78536 824 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 ARHGAP1Q07960 439 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 SIRPB2Q5JXA9 342 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 CDHR3Q6ZTQ4 885 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 COMMD2Q86X83 199 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 FIBCD1Q8N539 461 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 OR10G2Q8NGC3 310 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 SCAMP5Q8TAC9 235 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 WDR48Q8TAF3 677 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 CAMK1GQ96NX5 476 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 KATNBL1Q9H079 304 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 POLR2J3Q9H1A7 115 aaKnown RBP8.21□□□□□ -1.09
VPS36-201ENST00000378060 SMOC2Q9H3U7 446 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 SLC32A1Q9H598 525 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 ZNF696Q9H7X3 374 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 TMEM27Q9HBJ8 222 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 POLR3BQ9NW08 1133 aaPredicted RBP8.21□□□□□ -1.09
VPS36-201ENST00000378060 CNOT11Q9UKZ1 510 aaKnown RBP8.21□□□□□ -1.09
VPS36-201ENST00000378060 MKLN1Q9UL63 735 aa8.21□□□□□ -1.09
VPS36-201ENST00000378060 PCDHGA10Q9Y5H3 936 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms