RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SCN10AQ9Y5Y9 1956 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 CFAP54Q96N23 3096 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 COL4A6Q14031 1691 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 PRORSD1PA6NEY8 169 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 C1QTNF3-AMACRE9PGA6 284 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 CASQ2O14958 399 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-203ENST00000378037 RGS14O43566 566 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 KLF8O95600 359 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-203ENST00000378037 KLK1P06870 262 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 CAPN3P20807 821 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 TACR1P25103 407 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 OR1E2P47887 323 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 ATP6V0D1P61421 351 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 OLR1P78380 273 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 MC1RQ01726 317 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 TFF2Q03403 129 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 SLBPQ14493 270 aaKnown RBP eCLIP7.91□□□□□ -1.14
CKAP2-203ENST00000378037 CYP20A1Q6UW02 462 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 GPR180Q86V85 440 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 PHYKPLQ8IUZ5 450 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 OR4N5Q8IXE1 308 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 PIAS4Q8N2W9 510 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-203ENST00000378037 CELF5Q8N6W0 485 aaKnown RBP7.91□□□□□ -1.14
CKAP2-203ENST00000378037 PLA2G15Q8NCC3 412 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 XAGE5Q8WWM1 108 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 RAB8BQ92930 207 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 SPACA7Q96KW9 195 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 ZNF570Q96NI8 536 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 PKP2Q99959 881 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 COMMD8Q9NX08 183 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 KCTD5Q9NXV2 234 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 DRGXA6NNA5 263 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 KERAO60938 352 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 CLDN9O95484 217 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 MLYCDO95822 493 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 RYKP34925 604 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 HK3P52790 923 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 ADGRE1Q14246 886 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 SFT2D3Q587I9 215 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 PAGE3Q5JUK9 113 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 GLYATQ6IB77 296 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 TTC33Q6PID6 262 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-203ENST00000378037 NPAS3Q8IXF0 933 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 CLECL1Q8IZS7 167 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 FAM47BQ8NA70 645 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 RP9Q8TA86 221 aaKnown RBP7.91□□□□□ -1.14
CKAP2-203ENST00000378037 PIH1D2Q8WWB5 315 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 TFGQ92734 400 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-203ENST00000378037 DLG3Q92796 817 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 PLEKHG4BQ96PX9 1271 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 GSTO2Q9H4Y5 243 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 FAM124BQ9H5Z6 455 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-203ENST00000378037 SLC13A4Q9UKG4 626 aa7.91□□□□□ -1.14
CKAP2-203ENST00000378037 LOC285095A0A1B0GVY8 99 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 A0A1W2PQU0 124 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 DHRS12A0PJE2 317 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 TMEM114B3SHH9 223 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 B4DGG1 531 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 E7EQ34 232 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 SLCO1B7G3V0H7 640 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 KIF1CO43896 1103 aaKnown RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 ALDOCP09972 364 aaKnown RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 SBK3P0C264 359 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 CCNFP41002 786 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 SPINT3P49223 89 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 PTSQ03393 145 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 C2orf80Q0P641 193 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 SQLEQ14534 574 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 DMC1Q14565 340 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 GANABQ14697 944 aaKnown RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 HIST2H2ACQ16777 129 aaPredicted RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 TNFAIP8L3Q5GJ75 292 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 C6orf136Q5SQH8 315 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 HIST2H2AA3Q6FI13 130 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 AGTRAPQ6RW13 159 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 HORMAD1Q86X24 394 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 ST13P4Q8IZP2 240 aaPredicted RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 PATE1Q8WXA2 126 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 SMARCD2Q92925 531 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 KIAA1191Q96A73 305 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 CXorf40BQ96DE9 158 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 TOX2Q96NM4 488 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 CCDC106Q9BWC9 280 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 ANKRA2Q9H9E1 313 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 LIN28AQ9H9Z2 209 aaKnown RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 YBX2Q9Y2T7 364 aaKnown RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 SPTBN1Q01082 2364 aaKnown RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 ZNF638Q14966 1978 aaKnown RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 A0A088AWK7 358 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 KRBA1A5PL33 1030 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 PRNPP04156 253 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 ZNF140P52738 457 aaPredicted RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 RPS13P62277 151 aaKnown RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 IL5RAQ01344 420 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 PIGFQ07326 219 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 MSLNQ13421 630 aaPredicted RBP7.9□□□□□ -1.14
CKAP2-203ENST00000378037 AHI1Q8N157 1196 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 ADCY4Q8NFM4 1077 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 TSC22D3Q99576 134 aa7.9□□□□□ -1.14
CKAP2-203ENST00000378037 CCDC3Q9BQI4 270 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms