RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 ARIH1Q9Y4X5 557 aaPredicted RBP17.58■□□□□ 0.41
GNE-201ENST00000377902 TNPO3Q9Y5L0 923 aaKnown RBP17.58■□□□□ 0.41
GNE-201ENST00000377902 GMPPBQ9Y5P6 360 aa17.58■□□□□ 0.41
GNE-201ENST00000377902 ESR1P03372 595 aa17.58■□□□□ 0.4
GNE-201ENST00000377902 PTGER3P43115 390 aa17.58■□□□□ 0.4
GNE-201ENST00000377902 CLCN4P51793 760 aa17.58■□□□□ 0.4
GNE-201ENST00000377902 NKX2-5P52952 324 aaPredicted RBP17.58■□□□□ 0.4
GNE-201ENST00000377902 TWF1Q12792 350 aa17.58■□□□□ 0.4
GNE-201ENST00000377902 ACOX1Q15067 660 aa17.58■□□□□ 0.4
GNE-201ENST00000377902 CPSF6Q16630 551 aaKnown RBP eCLIP17.58■□□□□ 0.4
GNE-201ENST00000377902 CACHD1Q5VU97 1274 aa17.58■□□□□ 0.4
GNE-201ENST00000377902 PTRHD1Q6GMV3 140 aaKnown RBP17.58■□□□□ 0.4
GNE-201ENST00000377902 SHQ1Q6PI26 577 aaKnown RBP17.58■□□□□ 0.4
GNE-201ENST00000377902 ZNF513Q8N8E2 541 aaPredicted RBP17.58■□□□□ 0.4
GNE-201ENST00000377902 ZNF566Q969W8 418 aa17.58■□□□□ 0.4
GNE-201ENST00000377902 EGLN2Q96KS0 407 aa17.58■□□□□ 0.4
GNE-201ENST00000377902 CPPED1Q9BRF8 314 aaPredicted RBP17.58■□□□□ 0.4
GNE-201ENST00000377902 SIAEQ9HAT2 523 aa17.58■□□□□ 0.4
GNE-201ENST00000377902 ACOT13Q9NPJ3 140 aa17.58■□□□□ 0.4
GNE-201ENST00000377902 PCDHB5Q9Y5E4 795 aa17.58■□□□□ 0.4
GNE-201ENST00000377902 TTC36A6NLP5 189 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 RAD51BO15315 384 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 OAZ2O95190 189 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 DSC3Q14574 896 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 USP39Q53GS9 565 aaKnown RBP17.57■□□□□ 0.4
GNE-201ENST00000377902 SYT6Q5T7P8 510 aaPredicted RBP17.57■□□□□ 0.4
GNE-201ENST00000377902 AHSA2Q719I0 299 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 ADAMTSL2Q86TH1 951 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 CALHM3Q86XJ0 350 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 WWOXQ9NZC7 414 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 VPS9D1Q9Y2B5 631 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 PLXNA4Q9HCM2 1894 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 H3BNC9 293 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 FAM20BO75063 409 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 ITGAMP11215 1152 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 CD36P16671 472 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 CD40LGP29965 261 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 HOXA9P31269 272 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 FCGRTP55899 365 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 HUNKP57058 714 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 DOK6Q6PKX4 331 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 Q6ZPB1 254 aaPredicted RBP17.57■□□□□ 0.4
GNE-201ENST00000377902 DENND1CQ8IV53 801 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 PLPP6Q8IY26 295 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 MAGEH1Q9H213 219 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 DSN1Q9H410 356 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.57■□□□□ 0.4
GNE-201ENST00000377902 PCDHB9Q9Y5E1 797 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 PLXNA3P51805 1871 aa17.57■□□□□ 0.4
GNE-201ENST00000377902 DNAJB5O75953 348 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 KRT20P35900 424 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 MVKQ03426 396 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 CTXN3Q4LDR2 81 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 PRSS36Q5K4E3 855 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 USP50Q70EL3 339 aaPredicted RBP17.56■□□□□ 0.4
GNE-201ENST00000377902 RASAL3Q86YV0 1011 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 Q8N9G6 341 aaPredicted RBP17.56■□□□□ 0.4
GNE-201ENST00000377902 TTC29Q8NA56 475 aaPredicted RBP17.56■□□□□ 0.4
GNE-201ENST00000377902 TRPV1Q8NER1 839 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 OR6K2Q8NGY2 324 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 SH3GL1Q99961 368 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 ACPTQ9BZG2 426 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 SIRT5Q9NXA8 310 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 PDP1Q9P0J1 537 aaPredicted RBP17.56■□□□□ 0.4
GNE-201ENST00000377902 OPTCQ9UBM4 332 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 TPRKBQ9Y3C4 175 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 A8MX80 341 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 FAM220BPB1ANY3 271 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 KDELR3O43731 214 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 SLC25A14O95258 325 aaPredicted RBP17.56■□□□□ 0.4
GNE-201ENST00000377902 ST13P50502 369 aaKnown RBP17.56■□□□□ 0.4
GNE-201ENST00000377902 FAM189BP81408 668 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 VLDLRP98155 873 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 COLEC12Q5KU26 742 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 CAPN13Q6MZZ7 669 aaPredicted RBP17.56■□□□□ 0.4
GNE-201ENST00000377902 RSPO2Q6UXX9 243 aaPredicted RBP17.56■□□□□ 0.4
GNE-201ENST00000377902 DACH2Q96NX9 599 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 MAGIXQ9H6Y5 334 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 AMBNQ9NP70 447 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 ITM2CQ9NQX7 267 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 PPT2Q9UMR5 302 aa17.56■□□□□ 0.4
GNE-201ENST00000377902 MANBAO00462 879 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 PFDN6O15212 129 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 NBNO60934 754 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 ALOX5P09917 674 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 JUNDP17535 347 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 PTPN6P29350 595 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 TGFBR2P37173 567 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 SERPINB10P48595 397 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 ALDH7A1P49419 539 aaKnown RBP17.55■□□□□ 0.4
GNE-201ENST00000377902 NFE2Q16621 373 aaPredicted RBP17.55■□□□□ 0.4
GNE-201ENST00000377902 FAM171A1Q5VUB5 890 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 ATG9BQ674R7 924 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 PLD3Q8IV08 490 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 RNF175Q8N4F7 328 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 UROC1Q96N76 676 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 CD244Q9BZW8 370 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 SCN3BQ9NY72 215 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 IL37Q9NZH6 218 aa17.55■□□□□ 0.4
GNE-201ENST00000377902 ANKMY1Q9P2S6 941 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms