RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 CACUL1Q86Y37 369 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 VRK3Q8IV63 474 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 SLC44A2Q8IWA5 706 aaPredicted RBP12.62□□□□□ -0.39
USP11-204ENST00000377107 OR52J3Q8NH60 311 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 IGSF21Q96ID5 467 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 DEFB118Q96PH6 123 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 P2RY12Q9H244 342 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 MAGEE1Q9HCI5 957 aa12.62□□□□□ -0.39
USP11-204ENST00000377107 NEDD8-MDP1E9PL57 170 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 SAP18O00422 153 aaKnown RBP12.61□□□□□ -0.39
USP11-204ENST00000377107 TULP3O75386 442 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 INMTO95050 263 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 ALPLP05186 524 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 CCR7P32248 378 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 MAP2K4P45985 399 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 UTS2BQ765I0 119 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 PTRH1Q86Y79 214 aaKnown RBP12.61□□□□□ -0.39
USP11-204ENST00000377107 TSPEARQ8WU66 669 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 BARD1Q99728 777 aaKnown RBP12.61□□□□□ -0.39
USP11-204ENST00000377107 SH3GL1Q99961 368 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 MUC13Q9H3R2 512 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 HEBP1Q9NRV9 189 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 PTBP2Q9UKA9 531 aaKnown RBP12.61□□□□□ -0.39
USP11-204ENST00000377107 RIMKLBQ9ULI2 386 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 PIKFYVEQ9Y2I7 2098 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 M0R3G1 203 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 FADS2O95864 444 aaKnown RBP12.61□□□□□ -0.39
USP11-204ENST00000377107 OPN1SWP03999 348 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 CAPNS1P04632 268 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 AP1S1P61966 158 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 FPGSQ05932 587 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 SYTL3Q4VX76 610 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 CHST9Q7L1S5 443 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 CLECL1Q8IZS7 167 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 RMND5AQ9H871 391 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 DNAAF2Q9NVR5 837 aaKnown RBP12.61□□□□□ -0.39
USP11-204ENST00000377107 MTRRQ9UBK8 725 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 SAMHD1Q9Y3Z3 626 aaKnown RBP12.61□□□□□ -0.39
USP11-204ENST00000377107 OARD1Q9Y530 152 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 LOC100130705A0A1B0GUX0 176 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 FAM155AB1AL88 458 aaPredicted RBP12.61□□□□□ -0.39
USP11-204ENST00000377107 BCKDKO14874 412 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 HOXA2O43364 376 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 OR56A5P0C7T3 313 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 OCM2P0CE71 109 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 OCMP0CE72 109 aaPredicted RBP12.61□□□□□ -0.39
USP11-204ENST00000377107 HLCSP50747 726 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 NAE1Q13564 534 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 PDE12Q6L8Q7 609 aaKnown RBP12.61□□□□□ -0.39
USP11-204ENST00000377107 SPPL2AQ8TCT8 520 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 ROGDIQ9GZN7 287 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 PDP1Q9P0J1 537 aaPredicted RBP12.61□□□□□ -0.39
USP11-204ENST00000377107 C3orf18Q9UK00 162 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 BLOC1S6Q9UL45 172 aa12.61□□□□□ -0.39
USP11-204ENST00000377107 IL6P05231 212 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 IGFBP5P24593 272 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 PREPP48147 710 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 SMARCB1Q12824 385 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 C6orf141Q5SZD1 244 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 CRTC1Q6UUV9 634 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 CYP2U1Q7Z449 544 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 BPIFB1Q8TDL5 484 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 UBE2FQ969M7 185 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 AMBRA1Q9C0C7 1298 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 FPGTO14772 594 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 KLK8O60259 260 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 ANGPTL1O95841 491 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 LRG1P02750 347 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 KIR3DL1P43629 444 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 PHC1P78364 1004 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 GRIK2Q13002 908 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 SMN1Q16637 294 aaKnown RBP12.6□□□□□ -0.39
USP11-204ENST00000377107 ACBD5Q5T8D3 534 aaPredicted RBP12.6□□□□□ -0.39
USP11-204ENST00000377107 ALG1LQ6GMV1 187 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 ZNF773Q6PK81 442 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 DPY19L3Q6ZPD9 716 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 USP45Q70EL2 814 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 RBM23Q86U06 439 aaKnown RBP12.6□□□□□ -0.39
USP11-204ENST00000377107 CHST14Q8NCH0 376 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 ZNF548Q8NEK5 533 aaPredicted RBP12.6□□□□□ -0.39
USP11-204ENST00000377107 MAL2Q969L2 176 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 NODALQ96S42 347 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 RHNO1Q9BSD3 238 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 TTLL2Q9BWV7 592 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 VN1R3Q9BXE9 311 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 REXO4Q9GZR2 422 aaKnown RBP12.6□□□□□ -0.39
USP11-204ENST00000377107 RAD21L1Q9H4I0 556 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 KCTD5Q9NXV2 234 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 SNX6Q9UNH7 406 aa12.6□□□□□ -0.39
USP11-204ENST00000377107 TNFRSF1BP20333 461 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 MAGP20916 626 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 NSG1P42857 185 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 BMXP51813 675 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 EMP3P54852 163 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 ADARB1P78563 741 aaKnown RBP12.59□□□□□ -0.39
USP11-204ENST00000377107 ACSM2AQ08AH3 577 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 NFATC3Q12968 1075 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 RAPSNQ13702 412 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 STARD3Q14849 445 aa12.59□□□□□ -0.39
USP11-204ENST00000377107 ACSM2BQ68CK6 577 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms