RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ZNF570Q96NI8 536 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 LENG8Q96PV6 779 aaPredicted RBP13.34□□□□□ -0.27
GPC6-201ENST00000377047 GPATCH1Q9BRR8 931 aaKnown RBP13.34□□□□□ -0.27
GPC6-201ENST00000377047 ERVK-6Q9BXR3 956 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 FAM149AA5PLN7 773 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 ELOA3DA6NLF2 546 aaPredicted RBP13.34□□□□□ -0.27
GPC6-201ENST00000377047 GSC2O15499 205 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 DNAJA2O60884 412 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 TNFRSF21O75509 655 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 KLK1P06870 262 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 GRIA1P42261 906 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 ELOA3BQ3SY89 546 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 AVL9Q8NBF6 648 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 ELOA3Q8NG57 546 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 P2RY13Q9BPV8 354 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 IFT27Q9BW83 186 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 S100A14Q9HCY8 104 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 DUOX1Q9NRD9 1551 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 RGS20O76081 388 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 TYRP1P17643 537 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 CRISP3P54108 245 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 ZNF311Q5JNZ3 666 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 OLFML1Q6UWY5 402 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 TPRG1Q6ZUI0 275 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 ZNF527Q8NB42 609 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 PJA1Q8NG27 643 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 GIPC3Q8TF64 312 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 IL23AQ9NPF7 189 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 DHRS7Q9Y394 339 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 CAPN14A8MX76 684 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 PSMD9O00233 223 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 TMEM63AO94886 807 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 GADD45GO95257 159 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 PSMD7P51665 324 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 MTPNP58546 118 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 POC5Q8NA72 575 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 KLHDC7BQ96G42 594 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 CHMP1AQ9HD42 196 aaPredicted RBP13.34□□□□□ -0.27
GPC6-201ENST00000377047 IL1RAPQ9NPH3 570 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 SPATA6Q9NWH7 488 aaPredicted RBP13.34□□□□□ -0.27
GPC6-201ENST00000377047 SLC22A14Q9Y267 594 aa13.34□□□□□ -0.27
GPC6-201ENST00000377047 PLOD3O60568 738 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 IFNA6P05013 189 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 CSNK2A2P19784 350 aaPredicted RBP13.33□□□□□ -0.27
GPC6-201ENST00000377047 MLLT6P55198 1093 aaPredicted RBP13.33□□□□□ -0.27
GPC6-201ENST00000377047 PCBP2Q15366 365 aaKnown RBP eCLIP13.33□□□□□ -0.274e-7■■■■■ 29.8
GPC6-201ENST00000377047 TCEAL6Q6IPX3 200 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 GHDCQ8N2G8 530 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 GRHL3Q8TE85 626 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 HIST1H2AAQ96QV6 131 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 OR51V1Q9H2C8 321 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 SFXN1Q9H9B4 322 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 SERINC1Q9NRX5 453 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 FNIP2Q9P278 1114 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 VPS29Q9UBQ0 182 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 SLC2A6Q9UGQ3 507 aa13.33□□□□□ -0.27
GPC6-201ENST00000377047 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 PERM1Q5SV97 790 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 METTL21CQ5VZV1 264 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 ZBTB46Q86UZ6 589 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 THOC6Q86W42 341 aaKnown RBP13.33□□□□□ -0.28
GPC6-201ENST00000377047 CHST4Q8NCG5 386 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 TFGQ92734 400 aaPredicted RBP13.33□□□□□ -0.28
GPC6-201ENST00000377047 ARHGAP9Q9BRR9 750 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 EFCAB11Q9BUY7 163 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 PHF24Q9UPV7 400 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 TCRBV7S3A2A0A539 114 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 GKP32189 559 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 GPR68Q15743 365 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 UPP1Q16831 310 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 AKIRIN2Q53H80 203 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 RASSF6Q6ZTQ3 369 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 IQCHQ86VS3 1027 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 PLA2G15Q8NCC3 412 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 GLB1L3Q8NCI6 653 aaPredicted RBP13.33□□□□□ -0.28
GPC6-201ENST00000377047 SETD6Q8TBK2 473 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 CMTM7Q96FZ5 175 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 PIWIL1Q96J94 861 aaKnown RBP13.33□□□□□ -0.28
GPC6-201ENST00000377047 C1QTNF1Q9BXJ1 281 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 LGALS13Q9UHV8 139 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 SNX7Q9UNH6 387 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 HMGB3O15347 200 aaKnown RBP13.33□□□□□ -0.28
GPC6-201ENST00000377047 COCHO43405 550 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 CYP11A1P05108 521 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 MAGEA11P43364 429 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 OLR1P78380 273 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 TRAP1Q12931 704 aaKnown RBP13.33□□□□□ -0.28
GPC6-201ENST00000377047 TLR1Q15399 786 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 LCN1P1Q5VSP4 162 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 TXNRD3NBQ6F5E7 133 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 DCAF4L2Q8NA75 395 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 TMEM209Q96SK2 561 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 SGIP1Q9BQI5 828 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 SLC32A1Q9H598 525 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 CRTAC1Q9NQ79 661 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 ZCCHC3Q9NUD5 404 aaKnown RBP13.33□□□□□ -0.28
GPC6-201ENST00000377047 CNTN5O94779 1100 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 LDOC1O95751 146 aaPredicted RBP13.33□□□□□ -0.28
GPC6-201ENST00000377047 THRBP10828 461 aa13.33□□□□□ -0.28
GPC6-201ENST00000377047 TGFBR2P37173 567 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms