RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	FCRL4	Q96PJ5	515 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	TREX1	Q9NSU2	369 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	CNOT6	Q9ULM6	557 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	VPS4A	Q9UN37	437 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	VCAN	P13611	3396 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	ZSCAN9	O15535	394 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	OR10H2	O60403	315 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	OLFM2	O95897	454 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	B3GALT4	O96024	378 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	CD1D	P15813	335 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	GCA	P28676	217 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	ADPRH	P54922	357 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	DIO3	P55073	304 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	KCNJ2	P63252	427 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	C1orf189	Q5VU69	101 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	FITM2	Q8N6M3	262 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	OR5AK3P	Q8NH89	298 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	PMEPA1	Q969W9	287 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	DPYSL5	Q9BPU6	564 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	C17orf62	Q9BQA9	187 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	AIF1L	Q9BQI0	150 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	DPH7	Q9BTV6	452 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	OXSM	Q9NWU1	459 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	C2orf42	Q9NWW7	574 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	CACNA1B	Q00975	2339 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	PAPSS2	O95340	614 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	KLK1	P06870	262 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	TBL3	Q12788	808 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	WDR45B	Q5MNZ6	344 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	GOLGA7	Q7Z5G4	137 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	OR4N5	Q8IXE1	308 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	OR2T34	Q8NGX1	318 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	EID2B	Q96D98	161 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	PRR11	Q96HE9	360 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	GBP5	Q96PP8	586 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	BRINP2	Q9C0B6	783 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	LRTM1	Q9HBL6	345 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	CTPS2	Q9NRF8	586 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	NMRK1	Q9NWW6	199 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	ACTL7B	Q9Y614	415 aa		13.18	□□□□□ -0.3
DDR1-225	ENST00000376568	PTN	P21246	168 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	MMP12	P39900	470 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	FOXA1	P55317	472 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	HHEX	Q03014	270 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	FLOT2	Q14254	428 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	ITIH4	Q14624	930 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	C1orf52	Q8N6N3	182 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	RAB7B	Q96AH8	199 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	OR52E6	Q96RD3	313 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	PANX1	Q96RD7	426 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	RSPH9	Q9H1X1	276 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	CD248	Q9HCU0	757 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	PDE10A	Q9Y233	779 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	CKAP5	Q14008	2032 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	TP73	O15350	636 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	GABRG2	P18507	467 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	CR2	P20023	1033 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	MAG	P20916	626 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	VSX2	P58304	361 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	MAPKAPK3	Q16644	382 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	TRIM61	Q5EBN2	209 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	POMZP3	Q6PJE2	187 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	TDRP	Q86YL5	185 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	ZNF683	Q8IZ20	524 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	ZNF740	Q8NDX6	193 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	FAM120B	Q96EK7	910 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	DNAJA3	Q96EY1	480 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	ALG14	Q96F25	216 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	ZNF514	Q96K75	400 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	GSDMC	Q9BYG8	508 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	MAU2	Q9Y6X3	613 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	STX16-NPEPL1	H3BU86	382 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	SCTR	P47872	440 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	MAPK10	P53779	464 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	SRP54	P61011	504 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	SPIDR	Q14159	915 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	TOMM20	Q15388	145 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	SPDYC	Q5MJ68	293 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	NKAIN2	Q5VXU1	208 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	SULT1C3	Q6IMI6	304 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	SFTPA2	Q8IWL1	248 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	ZC3H7A	Q8IWR0	971 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	PHTF2	Q8N3S3	785 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	WDR48	Q8TAF3	677 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	SMAD5	Q99717	465 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	SORBS1	Q9BX66	1292 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	TBC1D10A	Q9BXI6	508 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	CPEB1	Q9BZB8	566 aa	Known RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	PHACTR1	Q9C0D0	580 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	FTSJ1	Q9UET6	329 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	MBD1	Q9UIS9	605 aa	Predicted RBP	13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	SPACA6	W5XKT8	324 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	COL4A6	Q14031	1691 aa		13.17	□□□□□ -0.3
DDR1-225	ENST00000376568	KERA	O60938	352 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	THRA	P10827	490 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	IL1RN	P18510	177 aa		13.16	□□□□□ -0.3
DDR1-225	ENST00000376568	CD38	P28907	300 aa		13.16	□□□□□ -0.3

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