RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 IL10RBQ08334 325 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 SYT12Q8IV01 421 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 SCML4Q8N228 414 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 IL4I1Q96RQ9 567 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 MBOAT4Q96T53 435 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 DERL2Q9GZP9 239 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 OR7A17O14581 309 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 TNFRSF10BO14763 440 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 RGS14O43566 566 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 SSX4O60224 188 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 GRK3P35626 688 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 FEN1P39748 380 aaKnown RBP11.52□□□□□ -0.57
MCF2L-202ENST00000375597 SERPINB10P48595 397 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 TGM4P49221 684 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 TTPAP49638 278 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 EEFSECP57772 596 aaKnown RBP11.52□□□□□ -0.57
MCF2L-202ENST00000375597 MEF2AQ02078 507 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-202ENST00000375597 SF3B4Q15427 424 aaKnown RBP eCLIP11.52□□□□□ -0.577e-6■■■■□ 19.9
MCF2L-202ENST00000375597 CHRNA6Q15825 494 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 PROSER1Q86XN7 944 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 OR4K1Q8NGD4 311 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 IRGQQ8WZA9 623 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 TMEM203Q969S6 136 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 OTULINQ96BN8 352 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 NECTIN4Q96NY8 510 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 MAF1Q9H063 256 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 FBXO44Q9H4M3 255 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 ATP13A3Q9H7F0 1226 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 CSNK1G1Q9HCP0 422 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 ERVK13-1Q9NX77 482 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 DNAJB9Q9UBS3 223 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 LRFN2Q9ULH4 789 aa11.52□□□□□ -0.57
MCF2L-202ENST00000375597 PRAMEF11O60813 436 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 CNOT3O75175 753 aaKnown RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 OTCP00480 354 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 RPS17P08708 135 aaKnown RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 BCKDHAP12694 445 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 SDHBP21912 280 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 SLC11A2P49281 568 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 STK19P49842 368 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 ATN1P54259 1190 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 COPZ1P61923 177 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 MANEALQ5VSG8 457 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 DPF3Q92784 378 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 ALPK1Q96QP1 1244 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 TMEM248Q9NWD8 314 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 MALT1Q9UDY8 824 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 EFCAB9A8MZ26 197 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 SNPHO15079 494 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 PDYNP01213 254 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 GGT1P19440 569 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 RPL9P32969 192 aaKnown RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 HOXD12P35452 270 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 ATP5C1P36542 298 aaKnown RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 RGS4P49798 205 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 CRISP3P54108 245 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 CDK5R2Q13319 367 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 SKIV2LQ15477 1246 aaKnown RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 RTP2Q5QGT7 225 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 C2orf69Q8N8R5 385 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 GTF2H4Q92759 462 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 UPF1Q92900 1129 aaKnown RBP eCLIP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 SH3KBP1Q96B97 665 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 APIPQ96GX9 242 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 UHRF1Q96T88 793 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 ADGRE3Q9BY15 652 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 FAM126AQ9BYI3 521 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 GABRQQ9UN88 632 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 SOX14O95416 240 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 UGT2B4P06133 528 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 CREMQ03060 361 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 TRAF3Q13114 568 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 ZNF846Q147U1 533 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 DGUOKQ16854 277 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 USP41Q3LFD5 358 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 USP39Q53GS9 565 aaKnown RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 UBE2UQ5VVX9 321 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 PACRGLQ8N7B6 248 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 LZICQ8WZA0 190 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 RBM4BQ9BQ04 359 aaKnown RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 RBM4Q9BWF3 364 aaKnown RBP11.51□□□□□ -0.57
MCF2L-202ENST00000375597 DCSTAMPQ9H295 470 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 RAD18Q9NS91 495 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 IMPAD1Q9NX62 359 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 SPASTQ9UBP0 616 aa11.51□□□□□ -0.57
MCF2L-202ENST00000375597 MIA3Q5JRA6 1907 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 MYO15AQ9UKN7 3530 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 UPK1AO00322 258 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 SCAMP1O15126 338 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 KLKB1P03952 638 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 FGF4P08620 206 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 ZNF12P17014 697 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 ENGP17813 658 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 MSH3P20585 1137 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 RPIAP49247 311 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 SMAD3P84022 425 aaKnown RBP11.5□□□□□ -0.57
MCF2L-202ENST00000375597 VLDLRP98155 873 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 LAIR1Q6GTX8 287 aa11.5□□□□□ -0.57
MCF2L-202ENST00000375597 SERPINA13PQ6UXR4 307 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms