RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 PDPK1O15530 556 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 PI15O43692 258 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 EOMESO95936 686 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 ADH1CP00326 375 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 GNRH1P01148 92 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 OR8J3Q8NGG0 315 aa20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 PHPT1Q9NRX4 125 aaPredicted RBP20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 FAM120CQ9NX05 1096 aaKnown RBP20.75■□□□□ 0.91
TGFBR1-202ENST00000374994 PRAMEF33A0A0G2JMD5 474 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 PRAMEF10O60809 474 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 TIGD5Q53EQ6 642 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 VARS2Q5ST30 1063 aaKnown RBP20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 PJA1Q8NG27 643 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 NDOR1Q9UHB4 597 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 CARD8Q9Y2G2 431 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 FAM172BPA6NC97 362 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 KELP23276 732 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 RABL3Q5HYI8 236 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 COQ5Q5HYK3 327 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 PLD6Q8N2A8 252 aaKnown RBP20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 PRICKLE1Q96MT3 831 aaPredicted RBP20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 LPIN3Q9BQK8 851 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 CACNB4O00305 520 aaPredicted RBP20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 CRISP3P54108 245 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 RASSF6Q6ZTQ3 369 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 MEAF6Q9HAF1 191 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 NECTIN3Q9NQS3 549 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 CKLFQ9UBR5 152 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 MRPS23Q9Y3D9 190 aaKnown RBP20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 HMGN1P05114 100 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 ACDQ96AP0 544 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 DSN1Q9H410 356 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 LIN28AQ9H9Z2 209 aaKnown RBP20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 CHD2O14647 1828 aaKnown RBP20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 SH3PXD2BA1X283 911 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 RNASEH2AO75792 299 aaKnown RBP20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 SERPINA3P01011 423 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 EBLN1P0CF75 366 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 ENGP17813 658 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 ATF6P18850 670 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 GRIA2P42262 883 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 SPIN4Q56A73 249 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 C1orf220Q5T0J3 134 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 KIAA1614Q5VZ46 1190 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 PAMR1Q6UXH9 720 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 SLC22A16Q86VW1 577 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 SLC35G5Q96KT7 338 aa20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 FCF1Q9Y324 198 aaKnown RBP20.74■□□□□ 0.91
TGFBR1-202ENST00000374994 SLC25A12O75746 678 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 ZNF45Q02386 682 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 CEACAM7Q14002 265 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 FRG2Q64ET8 278 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 HAVCR1Q96D42 359 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 FRG2BQ96QU4 278 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 BAIAP2Q9UQB8 552 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 HLCSP50747 726 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 CIR1Q86X95 450 aaPredicted RBP20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 TMEM199Q8N511 208 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 SNX33Q8WV41 574 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 MINDY3Q9H8M7 445 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 SEC14L4Q9UDX3 406 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 A0A0G2JLL6 359 aaPredicted RBP20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 TLR4O00206 839 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 PCDH7O60245 1069 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 CSTF2P33240 577 aaKnown RBP eCLIP20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 HMGCS1Q01581 520 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 PRRT2Q7Z6L0 340 aaPredicted RBP20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 ADGRG2Q8IZP9 1017 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 KLHL6Q8WZ60 621 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 ERMAPQ96PL5 475 aaPredicted RBP20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 MRTO4Q9UKD2 239 aaKnown RBP20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 FZD4Q9ULV1 537 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 DHRS4L1P0CG22 281 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 HTR1EP28566 365 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 DGKQP52824 942 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 MYLK3Q32MK0 819 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 SH3D19Q5HYK7 790 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 FBXL22Q6P050 247 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 TXNDC5Q8NBS9 432 aaKnown RBP20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 RTP4Q96DX8 246 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 ZDHHC3Q9NYG2 299 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 ZNF224Q9NZL3 707 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 RNF6Q9Y252 685 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 MANBAO00462 879 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 GSTT2BP0CG30 244 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 PUDPQ08623 228 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 TARDBPQ13148 414 aaKnown RBP eCLIP20.73■□□□□ 0.913e-6■■■■□ 21.4
TGFBR1-202ENST00000374994 FUT10Q6P4F1 479 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 FAM180AQ6UWF9 173 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 SIAH1Q8IUQ4 282 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 FIZ1Q96SL8 496 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 HTATIP2Q9BUP3 242 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 SPATA7Q9P0W8 599 aa20.73■□□□□ 0.91
TGFBR1-202ENST00000374994 A0A1W2PRB8 838 aa20.72■□□□□ 0.91
TGFBR1-202ENST00000374994 GTPBP1O00178 669 aaKnown RBP20.72■□□□□ 0.91
TGFBR1-202ENST00000374994 TOP3BO95985 862 aaKnown RBP20.72■□□□□ 0.91
TGFBR1-202ENST00000374994 POM121L1PQ3SYA9 428 aa20.72■□□□□ 0.91
TGFBR1-202ENST00000374994 LTN1O94822 1766 aa20.72■□□□□ 0.91
TGFBR1-202ENST00000374994 ISPDA4D126 451 aa20.72■□□□□ 0.91
TGFBR1-202ENST00000374994 HAS3O00219 553 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms