RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 PCM1Q15154 2024 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 K7EQS6 105 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PRAMEF4O60810 478 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ACPPP15309 386 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ZNF8P17098 575 aaPredicted RBP17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ITPKAP23677 461 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 TEAD1P28347 426 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 IMPA1P29218 277 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 BDKRB1P46663 353 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 GALK1P51570 392 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 HMGCS1Q01581 520 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 NFYCQ13952 458 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 MAP7D1Q3KQU3 841 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 TIGD2Q4W5G0 525 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 C2orf27AQ580R0 203 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 C6orf10Q5SRN2 563 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CACHD1Q5VU97 1274 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PRAMEF9Q5VWM5 478 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 GPR153Q6NV75 609 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PNCKQ6P2M8 343 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 THOC6Q86W42 341 aaKnown RBP17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 TMEM126BQ8IUX1 230 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SLC15A3Q8IY34 581 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 GLB1L3Q8NCI6 653 aaPredicted RBP17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 FAM156AQ8NDB6 213 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 OR2L2Q8NH16 312 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SELENOMQ8WWX9 145 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 RSRC1Q96IZ7 334 aaKnown RBP17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PKP4Q99569 1192 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ELOVL6Q9H5J4 265 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ZNHIT2Q9UHR6 403 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PCDHA9Q9Y5H5 950 aa17.51■□□□□ 0.39
HLA-DQB1-201ENST00000374943 C15orf38-AP3S2A0A0A6YYH1 394 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 KRT87PA6NCN2 255 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 C1orf105O95561 183 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 TCN1P20061 433 aaPredicted RBP17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 VARSP26640 1264 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SOX9P48436 509 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 MRPS22P82650 360 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 HTR4Q13639 388 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 KIAA0040Q15053 153 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PAGE3Q5JUK9 113 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ARPINQ7Z6K5 226 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 C11orf96Q7Z7L8 435 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CFAP206Q8IYR0 622 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PQLC1Q8N2U9 271 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PLA2G15Q8NCC3 412 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 EZH1Q92800 747 aaPredicted RBP17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 DUS3LQ96G46 650 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ZNF184Q99676 751 aaPredicted RBP17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 VCX3BQ9H321 246 aa17.5■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PRSS51A0A1B0GVH4 220 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 MGAT4DA6NG13 374 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ANHXE9PGG2 379 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 WASP42768 502 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 BNIP2Q12982 314 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CHIT1Q13231 466 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 E2F2Q14209 437 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CCSMST1Q4G0I0 132 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 USP39Q53GS9 565 aaKnown RBP17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SGO1Q5FBB7 561 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 IRAK1BP1Q5VVH5 260 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 FRG2Q64ET8 278 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ZNF776Q68DI1 518 aaPredicted RBP17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 Q7L0L9 218 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 KBTBD2Q8IY47 623 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 FAM9CQ8IZT9 166 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 DEFB123Q8N688 67 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CSGALNACT1Q8TDX6 532 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 TMEM125Q96AQ2 219 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 FAM131CQ96AQ9 280 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CMTM7Q96FZ5 175 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 MSLNLQ96KJ4 702 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 NECTIN4Q96NY8 510 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 FRG2BQ96QU4 278 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ZBTB18Q99592 522 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 FBRSQ9HAH7 460 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 IL1RL2Q9HB29 575 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 INTS7Q9NVH2 962 aaKnown RBP17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CMTM6Q9NX76 183 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 GPRC5BQ9NZH0 403 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 TMED5Q9Y3A6 229 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 COL6A3P12111 3177 aa17.49■□□□□ 0.39
HLA-DQB1-201ENST00000374943 TCRBV3S1A0A5B6 114 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 IGLON5A6NGN9 336 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SEC22BO75396 215 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 POP7O75817 140 aaKnown RBP17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SLC16A8O95907 504 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 HNF4AP41235 474 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 HALP42357 657 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 RPS14P62263 151 aaKnown RBP17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 RHDQ02161 417 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 IRF8Q02556 426 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CSTF3Q12996 717 aaKnown RBP17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 RPA4Q13156 261 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 NAE1Q13564 534 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CAPRIN1Q14444 709 aaKnown RBP17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 LRIT3Q3SXY7 679 aa17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.48■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SPATA24Q86W54 205 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms