RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CCR2P41597 374 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 SNRPD1P62314 119 aaKnown RBP16.63■□□□□ 0.25
RXRB-201ENST00000374680 ANKDD1AQ495B1 522 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 CCSMST1Q4G0I0 132 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 ZNF621Q6ZSS3 439 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 ELMO1Q92556 727 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 ACDQ96AP0 544 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 TRMT2BQ96GJ1 504 aaKnown RBP16.63■□□□□ 0.25
RXRB-201ENST00000374680 YME1L1Q96TA2 773 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 PCDH12Q9NPG4 1184 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 SPG21Q9NZD8 308 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 ATXN10Q9UBB4 475 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 ST14Q9Y5Y6 855 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 HCFC2Q9Y5Z7 792 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 GBF1Q92538 1859 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 SLC28A1O00337 649 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 KRT6AP02538 564 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 KRT6BP04259 564 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 PFKLP17858 780 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 PREPP48147 710 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 KRT6CP48668 564 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 PON2Q15165 354 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 TPRG1Q6ZUI0 275 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 ZNF548Q8NEK5 533 aaPredicted RBP16.63■□□□□ 0.25
RXRB-201ENST00000374680 TNIP2Q8NFZ5 429 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 GAB3Q8WWW8 586 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 THAP11Q96EK4 314 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 TMEM39AQ9NV64 488 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 WARS2Q9UGM6 360 aaKnown RBP16.63■□□□□ 0.25
RXRB-201ENST00000374680 hCG_2039718K7EN88 272 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 ARNTLO00327 626 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 AXIN1O15169 862 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 BMP10O95393 424 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 GBAP04062 536 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 NTRK1P04629 796 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 C8AP07357 584 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 CSF2RAP15509 400 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 ETV3P41162 512 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 HPCAP84074 193 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 BNIP3Q12983 259 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 SIM2Q14190 667 aaPredicted RBP16.63■□□□□ 0.25
RXRB-201ENST00000374680 ZBED5Q49AG3 693 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 CES5AQ6NT32 575 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 SLAIN1Q8ND83 568 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 SCRN2Q96FV2 425 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 KCTD5Q9NXV2 234 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 ZDHHC3Q9NYG2 299 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 PPT2Q9UMR5 302 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 PCDHGA8Q9Y5G5 932 aa16.63■□□□□ 0.25
RXRB-201ENST00000374680 PLXNA4Q9HCM2 1894 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 ANAPC1Q9H1A4 1944 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 CREG1O75629 220 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 MATN1P21941 496 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 ILF2Q12905 390 aaKnown RBP16.62■□□□□ 0.25
RXRB-201ENST00000374680 CHIT1Q13231 466 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 MPPE1Q53F39 396 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 USP39Q53GS9 565 aaKnown RBP16.62■□□□□ 0.25
RXRB-201ENST00000374680 LDLRAP1Q5SW96 308 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 ZCCHC8Q6NZY4 707 aaKnown RBP16.62■□□□□ 0.25
RXRB-201ENST00000374680 MACC1Q6ZN28 852 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 USP45Q70EL2 814 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 R3HCC1LQ7Z5L2 792 aaKnown RBP16.62■□□□□ 0.25
RXRB-201ENST00000374680 ERI1Q8IV48 349 aaKnown RBP16.62■□□□□ 0.25
RXRB-201ENST00000374680 RNF168Q8IYW5 571 aaPredicted RBP16.62■□□□□ 0.25
RXRB-201ENST00000374680 SLC32A1Q9H598 525 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 PFDN1O60925 122 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 ALPLP05186 524 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 EBLN1P0CF75 366 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 ZNF182P17025 639 aaPredicted RBP16.62■□□□□ 0.25
RXRB-201ENST00000374680 FSHRP23945 695 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 ADARB1P78563 741 aaKnown RBP16.62■□□□□ 0.25
RXRB-201ENST00000374680 KCTD21Q4G0X4 260 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 C22orf39Q6P5X5 142 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 GPR156Q8NFN8 814 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 STOML2Q9UJZ1 356 aa16.62■□□□□ 0.25
RXRB-201ENST00000374680 ZBBXA8MT70 800 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 PER2O15055 1255 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 ABCB1P08183 1280 aaPredicted RBP16.61■□□□□ 0.25
RXRB-201ENST00000374680 C1SP09871 688 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 CD9P21926 228 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 RPS3P23396 243 aaKnown RBP eCLIP16.61■□□□□ 0.25
RXRB-201ENST00000374680 ITGB8P26012 769 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 ALDH3A2P51648 485 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 TUBA4AP68366 448 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 KCNAB2Q13303 367 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 ZNF783Q6ZMS7 281 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 NECAB2Q7Z6G3 386 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 TCEAL8Q8IYN2 117 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 CLECL1Q8IZS7 167 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 PAPD5Q8NDF8 572 aaKnown RBP16.61■□□□□ 0.25
RXRB-201ENST00000374680 UGT2B28Q9BY64 529 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 AMBRA1Q9C0C7 1298 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 TMCO1Q9UM00 188 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 RFXANKO14593 260 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 XPNPEP2O43895 674 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 OR56A5P0C7T3 313 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 NTHL1P78549 312 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 ANGPTL8Q6UXH0 198 aa16.61■□□□□ 0.25
RXRB-201ENST00000374680 ZNF551Q7Z340 670 aaPredicted RBP16.61■□□□□ 0.25
RXRB-201ENST00000374680 HSD11B1LQ7Z5J1 315 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms