RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 MAPKAPK2P49137 400 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 GMPSP49915 693 aaPredicted RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 OR4D2P58180 307 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 UFM1P61960 85 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 DUSP7Q16829 419 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 RAB12Q6IQ22 244 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 PRR5LQ6MZQ0 368 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 TXNDC11Q6PKC3 985 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 MPZL3Q6UWV2 235 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 SELENOMQ8WWX9 145 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 KAT2AQ92830 837 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 GPR22Q99680 433 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 FUZQ9BT04 418 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 ZNF436Q9C0F3 470 aaPredicted RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 OR51E2Q9H255 320 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 ZNF334Q9HCZ1 680 aaPredicted RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 ENAMQ9NRM1 1142 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 MAGED1Q9Y5V3 778 aaPredicted RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 AKAP8O43823 692 aaKnown RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 PPP1R11O60927 126 aaPredicted RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 LRATO95237 230 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 ANXA8P13928 327 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 ZNF3P17036 446 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 SLC6A2P23975 617 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 FLI1Q01543 452 aaPredicted RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 SLC25A11Q02978 314 aaKnown RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 TARDBPQ13148 414 aaKnown RBP eCLIP10.04□□□□□ -0.8
CD28-202ENST00000374481 BAATQ14032 418 aaPredicted RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 BCL2L15Q5TBC7 163 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 OLFML2AQ68BL7 652 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 FAM198BQ6UWH4 519 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 ZNF367Q7RTV3 350 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 SPRED1Q7Z699 444 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 UFD1Q92890 307 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 TSSK3Q96PN8 268 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 TAAR1Q96RJ0 339 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 IL4I1Q96RQ9 567 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 PELOQ9BRX2 385 aaKnown RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 ARL6Q9H0F7 186 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 ERAP1Q9NZ08 941 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 HSPE1-MOB4S4R3N1 261 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 LRRC37A3O60309 1634 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 CLDN24A6NM45 220 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 SGTAO43765 313 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 RPP38P78345 283 aaKnown RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 CACNB2Q08289 660 aaPredicted RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 CNTN1Q12860 1018 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 IER5Q5VY09 327 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 DEFB132Q7Z7B7 95 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 TXNDC5Q8NBS9 432 aaKnown RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 MZB1Q8WU39 189 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 TFAP2BQ92481 460 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 ZNF778Q96MU6 729 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 TDRD3Q9H7E2 651 aaKnown RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 APOBEC3GQ9HC16 384 aaKnown RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 GMEB2Q9UKD1 530 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 NFASCO94856 1347 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 TRAV20A0A0B4J274 112 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 FAM155AB1AL88 458 aaPredicted RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 YKT6O15498 198 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 CREG1O75629 220 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 TCF3P15923 654 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 ARFIP1P53367 373 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 RAB2AP61019 212 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 GRK1Q15835 563 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 COL28A1Q2UY09 1125 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 TTLL9Q3SXZ7 439 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 CXorf57Q6NSI4 855 aaKnown RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 ESRP1Q6NXG1 681 aaKnown RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 PIGZQ86VD9 579 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 TXNRD3Q86VQ6 643 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 CHPFQ8IZ52 775 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 TMEM209Q96SK2 561 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 DTLQ9NZJ0 730 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 KLHL21Q9UJP4 597 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 REM1O75628 298 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 SNAPC5O75971 98 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 SIX3O95343 332 aaPredicted RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 OTCP00480 354 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 HMGN1P05114 100 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 OR56A5P0C7T3 313 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 CD6P30203 668 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 MLLT3P42568 568 aaPredicted RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 PPM1FP49593 454 aaPredicted RBP10.03□□□□□ -0.8
CD28-202ENST00000374481 DIO3P55073 304 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 AP3S2P59780 193 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 BRMS1LQ5PSV4 323 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 ZNF425Q6IV72 752 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 SCN4BQ8IWT1 228 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 STK40Q8N2I9 435 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 KDM1BQ8NB78 822 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 OR10G2Q8NGC3 310 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 PYURFQ96I23 114 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 SSX3Q99909 188 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 LPIN3Q9BQK8 851 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 FTHL17Q9BXU8 183 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 HDHD5Q9BXW7 423 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 PIGUQ9H490 435 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 ACOT13Q9NPJ3 140 aa10.03□□□□□ -0.8
CD28-202ENST00000374481 C11orf16Q9NQ32 467 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms