RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 RFX2P48378 723 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 PXNP49023 591 aaPredicted RBP13.12□□□□□ -0.31
SNX12-202ENST00000374274 TNK1Q13470 666 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 SEMA3AQ14563 771 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 SMN1Q16637 294 aaKnown RBP13.12□□□□□ -0.31
SNX12-202ENST00000374274 CCL15Q16663 113 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 RAB41Q5JT25 222 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 TWF2Q6IBS0 349 aaKnown RBP13.12□□□□□ -0.31
SNX12-202ENST00000374274 P3H2Q8IVL5 708 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 APH1BQ8WW43 257 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 IMP4Q96G21 291 aaKnown RBP13.12□□□□□ -0.31
SNX12-202ENST00000374274 DMRTB1Q96MA1 342 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 C1orf109Q9NX04 203 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 TOR4AQ9NXH8 423 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 KLHL21Q9UJP4 597 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 NUP50Q9UKX7 468 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 AGO1Q9UL18 857 aaKnown RBP13.12□□□□□ -0.31
SNX12-202ENST00000374274 RIMKLBQ9ULI2 386 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 SPEF1Q9Y4P9 236 aa13.12□□□□□ -0.31
SNX12-202ENST00000374274 A0A0G2JMP0 313 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 SLC35F4A4IF30 521 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 STX7O15400 261 aaKnown RBP13.11□□□□□ -0.31
SNX12-202ENST00000374274 BEST1O76090 585 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 CA5AP35218 305 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 ARHGAP1Q07960 439 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 MAD2L1Q13257 205 aaPredicted RBP13.11□□□□□ -0.31
SNX12-202ENST00000374274 EIF4HQ15056 248 aaKnown RBP13.11□□□□□ -0.31
SNX12-202ENST00000374274 MAPKAPK3Q16644 382 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 SV2CQ496J9 727 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 ESCO2Q56NI9 601 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 Q5BKY6 102 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 PRSS36Q5K4E3 855 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 AFMIDQ63HM1 303 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 C19orf48Q6RUI8 117 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 ALKAL1Q6UXT8 129 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 RNF165Q6ZSG1 346 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 PAQR9Q6ZVX9 377 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 ESX1Q8N693 406 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 CDYL2Q8N8U2 506 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 ZNF675Q8TD23 568 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 NCLNQ969V3 563 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 ITCHQ96J02 903 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 HRASLS5Q96KN8 279 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 COL21A1Q96P44 957 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 WDFY2Q96P53 400 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 ZNF717Q9BY31 904 aaPredicted RBP13.11□□□□□ -0.31
SNX12-202ENST00000374274 GABARAPL3Q9BY60 117 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 OLA1Q9NTK5 396 aaKnown RBP13.11□□□□□ -0.31
SNX12-202ENST00000374274 VNN3Q9NY84 501 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 CRYL1Q9Y2S2 319 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 U3KQV3 271 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 EVPLQ92817 2033 aa13.11□□□□□ -0.31
SNX12-202ENST00000374274 CYP4B1P13584 511 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 NCF1P14598 390 aaPredicted RBP13.1□□□□□ -0.31
SNX12-202ENST00000374274 HLA-DMAP28067 261 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 PRDX3P30048 256 aaKnown RBP13.1□□□□□ -0.31
SNX12-202ENST00000374274 RGS6P49758 472 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 TAF6P49848 677 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 ASAH1Q13510 395 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 RBBP7Q16576 425 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 C5orf22Q49AR2 442 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 TAPT1Q6NXT6 567 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 FAHD1Q6P587 224 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 CREB3L2Q70SY1 520 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 KRT73Q86Y46 540 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 SPNS2Q8IVW8 549 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 PGBD3Q8N328 593 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 NATD1Q8N6N6 113 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 OR5H6Q8NGV6 325 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 C9orf43Q8TAL5 461 aaPredicted RBP13.1□□□□□ -0.31
SNX12-202ENST00000374274 SH3RF2Q8TEC5 729 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 BRI3BPQ8WY22 251 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 FUBP1Q96AE4 644 aaKnown RBP13.1□□□□□ -0.31
SNX12-202ENST00000374274 SLC39A13Q96H72 371 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 PPP3R2Q96LZ3 170 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 SLC39A8Q9C0K1 460 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 SLC22A4Q9H015 551 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 ATXN3LQ9H3M9 355 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 TRIM39Q9HCM9 518 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 IL1RAPQ9NPH3 570 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 KRT84Q9NSB2 600 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 EVLQ9UI08 416 aaPredicted RBP13.1□□□□□ -0.31
SNX12-202ENST00000374274 DNMT3LQ9UJW3 386 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNX12-202ENST00000374274 CLCA1A8K7I4 914 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 AP3D1O14617 1153 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 PCDHGA12O60330 932 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 ERN1O75460 977 aaKnown RBP13.1□□□□□ -0.31
SNX12-202ENST00000374274 CCNDBP1O95273 360 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 GZMMP51124 257 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 ARSDP51689 593 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 DGKQP52824 942 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
SNX12-202ENST00000374274 PPP1R8Q12972 351 aaKnown RBP13.1□□□□□ -0.31
SNX12-202ENST00000374274 NPRL3Q12980 569 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 CARD16Q5EG05 197 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 RNF130Q86XS8 419 aa13.1□□□□□ -0.31
SNX12-202ENST00000374274 CCDC71Q8IV32 467 aaPredicted RBP13.1□□□□□ -0.31
SNX12-202ENST00000374274 MSRB3Q8IXL7 192 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms