RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 UROSP10746 265 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 NFKBIAP25963 317 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 HMOX2P30519 316 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 ETV3P41162 512 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 WASP42768 502 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 DIO3P55073 304 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 TMED1Q13445 227 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 GPR33Q49SQ1 333 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 FAM219BQ5XKK7 198 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 DPPA4Q7L190 304 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 KCNJ9Q92806 393 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 ARRDC3Q96B67 414 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 LINGO1Q96FE5 620 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 TMEM245Q9H330 911 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 CHCHD3Q9NX63 227 aaKnown RBP12.96□□□□□ -0.33
A1CF-204ENST00000373997 IKZF3Q9UKT9 509 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 HCN2Q9UL51 889 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 PCDHB1Q9Y5F3 818 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 COMMD10Q9Y6G5 202 aa12.96□□□□□ -0.33
A1CF-204ENST00000373997 COL4A2P08572 1712 aa12.96□□□□□ -0.34
A1CF-204ENST00000373997 hCG_2014768A0A024R1R8 64 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 TRIM64BA6NI03 449 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 CCDC154A6NI56 674 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 SLC22A3O75751 556 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 ESRRBO95718 433 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 ENO2P09104 434 aaPredicted RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 MMP12P39900 470 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 ERVK-8P63133 956 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 ELAVL3Q14576 367 aaKnown RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 CYBRD1Q53TN4 286 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 CCNYL2Q5T2Q4 361 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 LYPLAL1Q5VWZ2 237 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 ERAP2Q6P179 960 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 Q6ZVL8 140 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 MTSS1LQ765P7 747 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 CACUL1Q86Y37 369 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 NKAPQ8N5F7 415 aaKnown RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 SCAMP4Q969E2 229 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 WRAP53Q9BUR4 548 aaKnown RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 BDH2Q9BUT1 245 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 RIC8BQ9NVN3 520 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 SUN2Q9UH99 717 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 TRPM6Q9BX84 2022 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 FAM234BA2RU67 622 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 ASPDHA6ND91 283 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 C9JVG2 144 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 H3BQ06 376 aaPredicted RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 CDC7O00311 574 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 ARNTLO00327 626 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 BTN3A1O00481 513 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 GIPC1O14908 333 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 SNX2O60749 519 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 TRIM16O95361 564 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 ELFN1P0C7U0 828 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 RPS3P23396 243 aaKnown RBP eCLIP12.95□□□□□ -0.34
A1CF-204ENST00000373997 VARSP26640 1264 aaKnown RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 RPL10P27635 214 aaKnown RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 ZFP36L2P47974 494 aaKnown RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 HLCSP50747 726 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 CLCN7P51798 805 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 POLR2JP52435 117 aaKnown RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 PTPN5P54829 565 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 SEC13P55735 322 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 ADARB1P78563 741 aaKnown RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 EMX2Q04743 252 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 TSNQ15631 228 aaKnown RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 RABL3Q5HYI8 236 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 UGT3A1Q6NUS8 523 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 MMAAQ8IVH4 418 aaKnown RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 SMRP1Q8NCR6 262 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 DNAJB14Q8TBM8 379 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 EEF1AKMT1Q8WVE0 214 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 ITFG2Q969R8 447 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 FBXL20Q96IG2 436 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 RPF2Q9H7B2 306 aaKnown RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 SEMA4BQ9NPR2 832 aaPredicted RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 THAP10Q9P2Z0 257 aaPredicted RBP12.95□□□□□ -0.34
A1CF-204ENST00000373997 MAGEL2Q9UJ55 1249 aa12.95□□□□□ -0.34
A1CF-204ENST00000373997 SEC24DO94855 1032 aaPredicted RBP12.94□□□□□ -0.34
A1CF-204ENST00000373997 MTHFD1P11586 935 aaKnown RBP12.94□□□□□ -0.34
A1CF-204ENST00000373997 ITGB7P26010 798 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 EIF2DP41214 584 aaKnown RBP12.94□□□□□ -0.34
A1CF-204ENST00000373997 STT3AP46977 705 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 ENTPD1P49961 510 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 IL2P60568 153 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 CTBSQ01459 385 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 GRSF1Q12849 480 aaKnown RBP eCLIP12.94□□□□□ -0.34
A1CF-204ENST00000373997 HTR4Q13639 388 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 RAB39AQ14964 217 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 ACOX1Q15067 660 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 PAGE3Q5JUK9 113 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 ZDHHC20Q5W0Z9 365 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 Q6ZNX1 250 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 ZNF554Q86TJ5 538 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 OR56A4Q8NGH8 313 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 CSGALNACT1Q8TDX6 532 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 FAM129BQ96TA1 746 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 PRO3102Q9H379 93 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 FAM83DQ9H4H8 585 aa12.94□□□□□ -0.34
A1CF-204ENST00000373997 POLR1BQ9H9Y6 1135 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms