RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 HTR1EP28566 365 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ACVRL1P37023 503 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 RPL34P49207 117 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TAF6P49848 677 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CLCN5P51795 746 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 HNRNPFP52597 415 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 SLC35A2P78381 396 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TRAF3Q13114 568 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 GRIK4Q16099 956 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 AP5B1Q2VPB7 878 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 FAM171A1Q5VUB5 890 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 LRRC66Q68CR7 880 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PSAPL1Q6NUJ1 521 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 SUSD1Q6UWL2 747 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 FRA10AC1Q70Z53 315 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PDZD4Q76G19 769 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 LRRTM3Q86VH5 581 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ZFAND4Q86XD8 727 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 COLGALT2Q8IYK4 626 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 SAMD14Q8IZD0 417 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ATP6V0D2Q8N8Y2 350 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PIK3C3Q8NEB9 887 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF548Q8NEK5 533 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 OR6F1Q8NGZ6 308 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 OR52J3Q8NH60 311 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CDC26Q8NHZ8 85 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 METTL6Q8TCB7 284 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 KLRG1Q96E93 195 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 VMP1Q96GC9 406 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 VAT1Q99536 393 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 C16orf70Q9BSU1 422 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TTPALQ9BTX7 342 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 C2orf49Q9BVC5 232 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 LINC00597Q9H2U6 94 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ELP3Q9H9T3 547 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 NMUR1Q9HB89 426 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TIGARQ9NQ88 270 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TLR8Q9NR97 1041 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 RAD18Q9NS91 495 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 NSMCE4AQ9NXX6 385 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 KLHL42Q9P2K6 505 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 NUFIP1Q9UHK0 495 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 MUTYHQ9UIF7 546 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF112Q9UJU3 913 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ACAD8Q9UKU7 415 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TMCC3Q9ULS5 477 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TESMINQ9Y4I5 508 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PHIPQ8WWQ0 1821 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 AGAP5A6NIR3 686 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 PDZK1P1A8MUH7 402 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 PER2O15055 1255 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 RGS5O15539 181 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ICMTO60725 284 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 CPNE3O75131 537 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ANXA9O76027 345 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 SEMA3DO95025 777 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 PEX11BO96011 259 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 GLUD1P00367 558 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 CYP11A1P05108 521 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ITGB1P05556 798 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 STSP08842 583 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 FBXO45P0C2W1 286 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 COL6A1P12109 1028 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 PAMP19021 973 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ENDOUP21128 410 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 FDXRP22570 491 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 TACR1P25103 407 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ACVR2AP27037 513 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 RGRP47804 291 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ATP4BP51164 291 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 GEMP55040 296 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 EEFSECP57772 596 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 OR2B6P58173 313 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 VLDLRP98155 873 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 MXD1Q05195 221 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 SMARCB1Q12824 385 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 PRKG2Q13237 762 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 SUZ12Q15022 739 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 SMU1Q2TAY7 513 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF404Q494X3 552 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 FKBP1CQ5VVH2 108 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 TTC23Q5W5X9 447 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ANKS6Q68DC2 871 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ZCCHC8Q6NZY4 707 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 PRMT9Q6P2P2 845 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 NEK5Q6P3R8 708 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 SLC27A1Q6PCB7 646 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 OTOP2Q7RTS6 562 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 UNC93AQ86WB7 457 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 MIB1Q86YT6 1006 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 RASAL3Q86YV0 1011 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 CYP4Z2PQ8N1L4 340 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ESX1Q8N693 406 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 KLHDC9Q8NEP7 349 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 OR4F6Q8NGB9 312 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 APH1BQ8WW43 257 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 CCDC126Q96EE4 140 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 TXNDC15Q96J42 360 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 SENP8Q96LD8 212 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms