RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ALPPP05187 535 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 APLP1P51693 650 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 C2orf76Q3KRA6 126 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 CERS6Q6ZMG9 384 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 SSX6Q7RTT6 188 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 CIDECQ96AQ7 238 aaPredicted RBP12.23□□□□□ -0.45
HCFC1-202ENST00000369984 ZNF226Q9NYT6 803 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 PLK2Q9NYY3 685 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 MKLN1Q9UL63 735 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 M0R129 80 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 C8GP07360 202 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 CPN2P22792 545 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 SLC6A9P48067 706 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 KLF1Q13351 362 aaPredicted RBP12.23□□□□□ -0.45
HCFC1-202ENST00000369984 PITRM1Q5JRX3 1037 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 PLPP4Q5VZY2 271 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 FBXO15Q8NCQ5 510 aaPredicted RBP12.23□□□□□ -0.45
HCFC1-202ENST00000369984 KAZALD1Q96I82 304 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 PCBD2Q9H0N5 130 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 TRIM36Q9NQ86 728 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 B3GALT2O43825 422 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 SCGB2A1O75556 95 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 BMP6P22004 513 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 SPIN3Q5JUX0 258 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 ZNF517Q6ZMY9 492 aaPredicted RBP12.23□□□□□ -0.45
HCFC1-202ENST00000369984 STOML3Q8TAV4 291 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 CNDP2Q96KP4 475 aaKnown RBP12.23□□□□□ -0.45
HCFC1-202ENST00000369984 SCGB3A2Q96PL1 93 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 SMURF1Q9HCE7 757 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 EIF2B4Q9UI10 523 aaKnown RBP12.23□□□□□ -0.45
HCFC1-202ENST00000369984 MMP8P22894 467 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 RYKP34925 604 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 NDUFV1P49821 464 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 GPR139Q6DWJ6 353 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 ASB18Q6ZVZ8 466 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 ATAD1Q8NBU5 361 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 OR14C36Q8NHC7 312 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 C16orf58Q96GQ5 468 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 SLC35G5Q96KT7 338 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 RIPOR3Q96MK2 946 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 TTPALQ9BTX7 342 aa12.23□□□□□ -0.45
HCFC1-202ENST00000369984 C12orf65Q9H3J6 166 aaKnown RBP12.23□□□□□ -0.45
HCFC1-202ENST00000369984 DNAAF2Q9NVR5 837 aaKnown RBP12.23□□□□□ -0.45
HCFC1-202ENST00000369984 RPL36Q9Y3U8 105 aaKnown RBP12.23□□□□□ -0.45
HCFC1-202ENST00000369984 SSX4O60224 188 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 MAGEA8P43361 318 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 LIMK2P53671 638 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 TMBIM6P55061 237 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 S100A10P60903 97 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 SEMA3AQ14563 771 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 TMEM44Q2T9K0 475 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 PRPF38BQ5VTL8 546 aaKnown RBP12.22□□□□□ -0.45
HCFC1-202ENST00000369984 SLC8B1Q6J4K2 584 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 MON1BQ7L1V2 547 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 PLD5Q8N7P1 536 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 FARSAQ9Y285 508 aaKnown RBP12.22□□□□□ -0.45
HCFC1-202ENST00000369984 TCAF1Q9Y4C2 921 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 CYP11A1P05108 521 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 OR1D2P34982 312 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 FIP1L1Q6UN15 594 aaKnown RBP12.22□□□□□ -0.45
HCFC1-202ENST00000369984 VSIG10LQ86VR7 867 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 ZNF527Q8NB42 609 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 KCT2Q8NC54 265 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 JOSD2Q8TAC2 188 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 C12orf43Q96C57 262 aaKnown RBP12.22□□□□□ -0.45
HCFC1-202ENST00000369984 CCDC120Q96HB5 630 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 ZNF700Q9H0M5 742 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 GLS2Q9UI32 602 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 ACOX3O15254 700 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 YES1P07947 543 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 NCBP2P52298 156 aaKnown RBP eCLIP12.22□□□□□ -0.45
HCFC1-202ENST00000369984 ARFRP1Q13795 201 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 LINGO4Q6UY18 593 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 GET4Q7L5D6 327 aaPredicted RBP12.22□□□□□ -0.45
HCFC1-202ENST00000369984 TUBG2Q9NRH3 451 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 NUDT15Q9NV35 164 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 ABI3Q9P2A4 366 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 TCAF2A6NFQ2 919 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 CDK14O94921 469 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 CHIT1Q13231 466 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 GLB1L3Q8NCI6 653 aaPredicted RBP12.22□□□□□ -0.45
HCFC1-202ENST00000369984 PPTC7Q8NI37 304 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 THAP6Q8TBB0 222 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 HMCESQ96FZ2 354 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 ZNF717Q9BY31 904 aaPredicted RBP12.22□□□□□ -0.45
HCFC1-202ENST00000369984 CFL2Q9Y281 166 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 NT5C1B-RDH14C9J2C7 533 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 B4GALT5O43286 388 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 SLC6A4P31645 630 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 CSTF2P33240 577 aaKnown RBP eCLIP12.22□□□□□ -0.45
HCFC1-202ENST00000369984 CXCL9Q07325 125 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 TAF10Q12962 218 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 ERI1Q8IV48 349 aaKnown RBP12.22□□□□□ -0.45
HCFC1-202ENST00000369984 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 AURKAO14965 403 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 MUSKO15146 869 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 NPHS1O60500 1241 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 PVALBP20472 110 aaPredicted RBP12.22□□□□□ -0.45
HCFC1-202ENST00000369984 C1QTNF8P60827 252 aa12.22□□□□□ -0.45
HCFC1-202ENST00000369984 DSC2Q02487 901 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms