RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 RFPL4BQ6ZWI9 263 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 SNX20Q7Z614 316 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 NRARPQ7Z6K4 114 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 KRTCAP2Q8N6L1 136 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 OR4F6Q8NGB9 312 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 EEF1AKMT1Q8WVE0 214 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 DNASE1L2Q92874 299 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 MYLPFQ96A32 169 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 LINGO1Q96FE5 620 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 MROH8Q9H579 483 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 TRIM39Q9HCM9 518 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 SARS2Q9NP81 518 aaKnown RBP16.52■□□□□ 0.23
DKC1-201ENST00000369550 PLSCR3Q9NRY6 295 aa16.52■□□□□ 0.23
DKC1-201ENST00000369550 CCDC59Q9P031 241 aaKnown RBP16.52■□□□□ 0.23
DKC1-201ENST00000369550 TRMT6Q9UJA5 497 aaKnown RBP16.52■□□□□ 0.23
DKC1-201ENST00000369550 IL6P05231 212 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 SOX6P35712 828 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 RPP38P78345 283 aaKnown RBP16.51■□□□□ 0.23
DKC1-201ENST00000369550 STARD3Q14849 445 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 LRRC26Q2I0M4 334 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 TYSND1Q2T9J0 566 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 CCDC71Q8IV32 467 aaPredicted RBP16.51■□□□□ 0.23
DKC1-201ENST00000369550 TCAIMQ8N3R3 496 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 SIMC1Q8NDZ2 872 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 RASSF5Q8WWW0 418 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 PPP3R2Q96LZ3 170 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 SEMA3CQ99985 751 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 NXF2Q9GZY0 626 aaKnown RBP16.51■□□□□ 0.23
DKC1-201ENST00000369550 GABARAPL1Q9H0R8 117 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 IRF2BPLQ9H1B7 796 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 OR51E2Q9H255 320 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 SLC6A13Q9NSD5 602 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 SAMHD1Q9Y3Z3 626 aaKnown RBP16.51■□□□□ 0.23
DKC1-201ENST00000369550 GPSM3Q9Y4H4 160 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 IPPQ9Y573 584 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 SNX8Q9Y5X2 465 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 MAU2Q9Y6X3 613 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 LOC285095A0A1B0GVY8 99 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 FAM220BPB1ANY3 271 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 VPS26AO75436 327 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 SNX4O95219 450 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 IGLV3-25P01717 112 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 HSMCR30P0CW71 290 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 HOXB6P17509 224 aaKnown RBP16.51■□□□□ 0.23
DKC1-201ENST00000369550 HOXA9P31269 272 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 IL2P60568 153 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 C10orf111Q8N326 155 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 LIX1Q8N485 282 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 BEND7Q8N7W2 519 aaPredicted RBP16.51■□□□□ 0.23
DKC1-201ENST00000369550 CLHC1Q8NHS4 586 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 BRSK1Q8TDC3 778 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 TRIM63Q969Q1 353 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 CDKN2AIPNLQ96HQ2 116 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 TRIM62Q9BVG3 475 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 GIMAP4Q9NUV9 329 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 FNDC3AQ9Y2H6 1198 aaKnown RBP16.51■□□□□ 0.23
DKC1-201ENST00000369550 LYVE1Q9Y5Y7 322 aa16.51■□□□□ 0.23
DKC1-201ENST00000369550 PDCD11Q14690 1871 aaKnown RBP16.51■□□□□ 0.23
DKC1-201ENST00000369550 KRT87PA6NCN2 255 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 CRYZL1O95825 349 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 DNAJA1P31689 397 aaKnown RBP16.5■□□□□ 0.23
DKC1-201ENST00000369550 GRK5P34947 590 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 C18orf21Q32NC0 220 aaPredicted RBP16.5■□□□□ 0.23
DKC1-201ENST00000369550 TBRG1Q3YBR2 411 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 XKR4Q5GH76 650 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 ATG9BQ674R7 924 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 MILR1Q7Z6M3 343 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 ARRDC2Q8TBH0 407 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 PIK3R3Q92569 461 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 ST6GAL2Q96JF0 529 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 CENPOQ9BU64 300 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 SAMD4AQ9UPU9 718 aaKnown RBP16.5■□□□□ 0.23
DKC1-201ENST00000369550 AP3M1Q9Y2T2 418 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 FFAR3O14843 346 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 GPR42O15529 346 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 TLL1O43897 1013 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 NIPSNAP2O75323 286 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 SEC22BO75396 215 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 FGF1P05230 155 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 PIK3CGP48736 1102 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 CYP4F2P78329 520 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 CACHD1Q5VU97 1274 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 MSANTD2Q6P1R3 559 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 TRAF7Q6Q0C0 670 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 ENTHD1Q8IYW4 607 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 TMEM86AQ8N2M4 240 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 MED30Q96HR3 178 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 PHOX2BQ99453 314 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 KCNS3Q9BQ31 491 aa16.5■□□□□ 0.23
DKC1-201ENST00000369550 RPRD1BQ9NQG5 326 aaKnown RBP16.5■□□□□ 0.23
DKC1-201ENST00000369550 FAM25AB3EWG3 89 aa16.49■□□□□ 0.23
DKC1-201ENST00000369550 FAM25CB3EWG5 89 aa16.49■□□□□ 0.23
DKC1-201ENST00000369550 FAM25GB3EWG6 89 aa16.49■□□□□ 0.23
DKC1-201ENST00000369550 HLA-DPA1P20036 260 aa16.49■□□□□ 0.23
DKC1-201ENST00000369550 FPR1P21462 350 aa16.49■□□□□ 0.23
DKC1-201ENST00000369550 DDOSTP39656 456 aa16.49■□□□□ 0.23
DKC1-201ENST00000369550 ADCYAP1R1P41586 468 aa16.49■□□□□ 0.23
DKC1-201ENST00000369550 MAGEA2P43356 314 aa16.49■□□□□ 0.23
DKC1-201ENST00000369550 UGT2B15P54855 530 aa16.49■□□□□ 0.23
DKC1-201ENST00000369550 GALK2Q01415 458 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms