RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 GJD3Q8N144 294 aa25.9■■□□□ 1.74
EFNA1-202ENST00000368407 TTC30BQ8N4P2 665 aa25.9■■□□□ 1.74
EFNA1-202ENST00000368407 CHCHD4Q8N4Q1 142 aa25.9■■□□□ 1.74
EFNA1-202ENST00000368407 MINDY2Q8NBR6 621 aa25.9■■□□□ 1.74
EFNA1-202ENST00000368407 TMEM245Q9H330 911 aa25.9■■□□□ 1.74
EFNA1-202ENST00000368407 H0Y858 1186 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 KATNA1O75449 491 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 MLYCDO95822 493 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 CHEK2O96017 543 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 EPOP01588 193 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 ATXN1LP0C7T5 689 aaKnown RBP25.89■■□□□ 1.74
EFNA1-202ENST00000368407 UROSP10746 265 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 MTHFD1P11586 935 aaKnown RBP25.89■■□□□ 1.74
EFNA1-202ENST00000368407 DRD1P21728 446 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 HRH2P25021 359 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 TIE1P35590 1138 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 BNIP3Q12983 259 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 TOP3AQ13472 1001 aaPredicted RBP25.89■■□□□ 1.74
EFNA1-202ENST00000368407 GTF2IRD2BQ6EKJ0 949 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 SERPINA13PQ6UXR4 307 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 DPY19L3Q6ZPD9 716 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 GTF2IRD2Q86UP8 949 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 HID1Q8IV36 788 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 KIAA2013Q8IYS2 634 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 ZNF513Q8N8E2 541 aaPredicted RBP25.89■■□□□ 1.74
EFNA1-202ENST00000368407 OR2A12Q8NGT7 310 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 MSANTD3Q96H12 275 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 NSMCE2Q96MF7 247 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 MUTYHQ9UIF7 546 aa25.89■■□□□ 1.74
EFNA1-202ENST00000368407 MUC22E2RYF6 1773 aaPredicted RBP25.89■■□□□ 1.73
EFNA1-202ENST00000368407 KRBA1A5PL33 1030 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 CFAP99D6REC4 459 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 BOLA2-SMG1P6H3BVE0 249 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 HOXB6P17509 224 aaKnown RBP25.88■■□□□ 1.73
EFNA1-202ENST00000368407 HLA-DPA1P20036 260 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 POLR2JP52435 117 aaKnown RBP25.88■■□□□ 1.73
EFNA1-202ENST00000368407 NEDD8Q15843 81 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 PFKFB4Q16877 469 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 SIRPB2Q5JXA9 342 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 XAF1Q6GPH4 301 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 XKR5Q6UX68 686 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 KDELC2Q7Z4H8 507 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 THAP5Q7Z6K1 395 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 RYBPQ8N488 228 aaPredicted RBP25.88■■□□□ 1.73
EFNA1-202ENST00000368407 POP5Q969H6 163 aaKnown RBP25.88■■□□□ 1.73
EFNA1-202ENST00000368407 VOPP1Q96AW1 172 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 CCDC115Q96NT0 180 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 NAA50Q9GZZ1 169 aaKnown RBP25.88■■□□□ 1.73
EFNA1-202ENST00000368407 SUN2Q9UH99 717 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 NDRG2Q9UN36 371 aaKnown RBP25.88■■□□□ 1.73
EFNA1-202ENST00000368407 A0A0C4DFX4 3053 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 RPP40O75818 363 aaKnown RBP25.88■■□□□ 1.73
EFNA1-202ENST00000368407 SIX3O95343 332 aaPredicted RBP25.88■■□□□ 1.73
EFNA1-202ENST00000368407 CLIC3O95833 236 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 IGSF6O95976 241 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 ALPLP05186 524 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 FGF1P05230 155 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 RAP2AP10114 183 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 CHRM3P20309 590 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 MATN1P21941 496 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 WASP42768 502 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 SNRPD1P62314 119 aaKnown RBP25.88■■□□□ 1.73
EFNA1-202ENST00000368407 C2orf27AQ580R0 203 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 CARD16Q5EG05 197 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 RABL3Q5HYI8 236 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 NCEH1Q6PIU2 408 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 FRA10AC1Q70Z53 315 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 GALNT13Q8IUC8 556 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 FBXO39Q8N4B4 442 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 CHST14Q8NCH0 376 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 ERLEC1Q96DZ1 483 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 NANOGQ9H9S0 305 aa25.88■■□□□ 1.73
EFNA1-202ENST00000368407 MUC3AQ02505 3323 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 UPK1AO00322 258 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 CD3EAPO15446 510 aaKnown RBP25.87■■□□□ 1.73
EFNA1-202ENST00000368407 SERPINF2P08697 491 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 LINC00032P0C843 101 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 THRBP10828 461 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 HNRNPA1L2Q32P51 320 aaKnown RBP25.87■■□□□ 1.73
EFNA1-202ENST00000368407 CHPFQ8IZ52 775 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 SNX19Q92543 992 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 NTN4Q9HB63 628 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 FANCEQ9HB96 536 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 USE1Q9NZ43 259 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 FBXL21Q9UKT6 434 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 PCDHGC4Q9Y5F7 938 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 PTGDR2Q9Y5Y4 395 aa25.87■■□□□ 1.73
EFNA1-202ENST00000368407 TMX2-CTNND1H3BSU7 103 aa25.86■■□□□ 1.73
EFNA1-202ENST00000368407 CD9P21926 228 aa25.86■■□□□ 1.73
EFNA1-202ENST00000368407 CRHBPP24387 322 aa25.86■■□□□ 1.73
EFNA1-202ENST00000368407 EEF1DP29692 281 aaKnown RBP25.86■■□□□ 1.73
EFNA1-202ENST00000368407 PSMD7P51665 324 aa25.86■■□□□ 1.73
EFNA1-202ENST00000368407 TRAF2Q12933 501 aa25.86■■□□□ 1.73
EFNA1-202ENST00000368407 PAGE3Q5JUK9 113 aa25.86■■□□□ 1.73
EFNA1-202ENST00000368407 ZFAND4Q86XD8 727 aa25.86■■□□□ 1.73
EFNA1-202ENST00000368407 PJA1Q8NG27 643 aa25.86■■□□□ 1.73
EFNA1-202ENST00000368407 OR52E4Q8NGH9 312 aa25.86■■□□□ 1.73
EFNA1-202ENST00000368407 DNAJB14Q8TBM8 379 aa25.86■■□□□ 1.73
EFNA1-202ENST00000368407 ZNF347Q96SE7 839 aa25.86■■□□□ 1.73
EFNA1-202ENST00000368407 RAD21L1Q9H4I0 556 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms