RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 FRS2Q8WU20 508 aa17.64■□□□□ 0.41
UBQLN4-201ENST00000368309 SCAMP4Q969E2 229 aa17.64■□□□□ 0.41
UBQLN4-201ENST00000368309 P2RY13Q9BPV8 354 aa17.64■□□□□ 0.41
UBQLN4-201ENST00000368309 FAM118AQ9NWS6 357 aa17.64■□□□□ 0.41
UBQLN4-201ENST00000368309 GPRC5BQ9NZH0 403 aa17.64■□□□□ 0.41
UBQLN4-201ENST00000368309 CIDEBQ9UHD4 219 aa17.64■□□□□ 0.41
UBQLN4-201ENST00000368309 PPT2Q9UMR5 302 aa17.64■□□□□ 0.41
UBQLN4-201ENST00000368309 PRAMEF4O60810 478 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 E2F6O75461 281 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 VAC14Q08AM6 782 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 MEP1AQ16819 746 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 PRAMEF9Q5VWM5 478 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 THAP5Q7Z6K1 395 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 BEND7Q8N7W2 519 aaPredicted RBP17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 LYSMD1Q96S90 227 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 EXD2Q9NVH0 621 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 SPG21Q9NZD8 308 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 B4GALT6Q9UBX8 382 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 CCL26Q9Y258 94 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 LEFTY2O00292 366 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 OR56A5P0C7T3 313 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 MATN1P21941 496 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 AOAHP28039 575 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 CLDN8P56748 225 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 SPIDRQ14159 915 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 R3HCC1LQ7Z5L2 792 aaKnown RBP17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 OSBPL10Q9BXB5 764 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 BBS2Q9BXC9 721 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 EBPLQ9BY08 206 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 SLC29A3Q9BZD2 475 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 DCAF13Q9NV06 445 aaKnown RBP17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 TRBV5-3A0A0A0MS03 114 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 TGM5O43548 720 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 HS6ST1O60243 411 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 SCELO95171 688 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 SMU1Q2TAY7 513 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 ZNF648Q5T619 568 aaPredicted RBP17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 ASTLQ6HA08 431 aaPredicted RBP17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 C22orf39Q6P5X5 142 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 Q6ZVU0 165 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 VWCEQ96DN2 955 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 SLC12A9Q9BXP2 914 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 SLC46A2Q9BY10 475 aa17.63■□□□□ 0.41
UBQLN4-201ENST00000368309 C1SP09871 688 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 CBSLP0DN79 551 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 SDC1P18827 310 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 CD247P20963 164 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 CBSP35520 551 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 LAPTM4AQ15012 233 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 TMEM25Q86YD3 366 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 C8orf59Q8N0T1 100 aaPredicted RBP17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 ASB11Q8WXH4 323 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 THAP11Q96EK4 314 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 HSPBAP1Q96EW2 488 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 MBOAT4Q96T53 435 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 HERC2P3Q9BVR0 1158 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 YTHDF1Q9BYJ9 559 aaKnown RBP17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 GALNT8Q9NY28 637 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 DOCK6Q96HP0 2047 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 HALP42357 657 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 KCNAB2Q13303 367 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 SLC14A1Q13336 389 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 OR4F3Q6IEY1 312 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 FAM81AQ8TBF8 368 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 SNX6Q9UNH7 406 aa17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 FAF1Q9UNN5 650 aaPredicted RBP17.62■□□□□ 0.41
UBQLN4-201ENST00000368309 DCKP27707 260 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 SF1Q15637 639 aaKnown RBP17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 TRIM60Q495X7 471 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 MPP7Q5T2T1 576 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 CES5AQ6NT32 575 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 ZNF773Q6PK81 442 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 DOK6Q6PKX4 331 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 ZNF551Q7Z340 670 aaPredicted RBP17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 GPR149Q86SP6 731 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 GALNT10Q86SR1 603 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 BPIFB6Q8NFQ5 453 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 ECHDC3Q96DC8 303 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 CORO1BQ9BR76 489 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 CPPED1Q9BRF8 314 aaPredicted RBP17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 OSBPL6Q9BZF3 934 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 KCNH6Q9H252 994 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 A0A0J9YVX5 310 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 SH3BGRLO75368 114 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 ERN1O75460 977 aaKnown RBP17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 PFKLP17858 780 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 SPINT3P49223 89 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 PPP2R2BQ00005 443 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 CPXM2Q8N436 756 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 ZNF296Q8WUU4 475 aaPredicted RBP17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 ITCHQ96J02 903 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 ASIC5Q9NY37 505 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 A0A1W2PQ67 120 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 RANBP1P43487 201 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 C16orf72Q14CZ0 275 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 ATG9BQ674R7 924 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 DDX53Q86TM3 631 aaKnown RBP17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 RBM23Q86U06 439 aaKnown RBP17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 TMEM132CQ8N3T6 1108 aa17.61■□□□□ 0.41
UBQLN4-201ENST00000368309 CDC26Q8NHZ8 85 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms