RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 NFS1Q9Y697 457 aa9.53□□□□□ -0.88
CD48-202ENST00000368046 CHD6Q8TD26 2715 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 LOC100996750A0A140TA64 210 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 RNF223E7ERA6 249 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 RASGRF2O14827 1237 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 RAD51CO43502 376 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 VPS26AO75436 327 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 URI1O94763 535 aaPredicted RBP9.52□□□□□ -0.89
CD48-202ENST00000368046 KIAA0754O94854 1291 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 CBSLP0DN79 551 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 ST6GAL1P15907 406 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 UGT2B7P16662 529 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 ZNF28P17035 718 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 GABRB3P28472 473 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 CBSP35520 551 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 CACNA1BQ00975 2339 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 RHDQ02161 417 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 CAV1Q03135 178 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 C2orf54Q08AI8 447 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 SLC5A12Q1EHB4 618 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 KLHL38Q2WGJ6 581 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 PWWP2BQ6NUJ5 590 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 UGT3A1Q6NUS8 523 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 CYHR1Q6ZMK1 362 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 NEK10Q6ZWH5 1172 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 GALNT7Q86SF2 657 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 VASH2Q86V25 355 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 CNTN4Q8IWV2 1026 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 ESX1Q8N693 406 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 LINC01555Q8NAE3 123 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 FBXO36Q8NEA4 188 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 OR2L8Q8NGY9 312 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 FLVCR1-AS1Q8TAF5 88 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 C16orf45Q96MC5 204 aaPredicted RBP9.52□□□□□ -0.89
CD48-202ENST00000368046 SLC30A3Q99726 388 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 AARSD1Q9BTE6 412 aaKnown RBP9.52□□□□□ -0.89
CD48-202ENST00000368046 RAB11FIP5Q9BXF6 653 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 KRTAP4-6Q9BYQ5 205 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 CHRNA10Q9GZZ6 450 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 DPH5Q9H2P9 285 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 PLAC1Q9HBJ0 212 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 MOCS1Q9NZB8 636 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 RALYQ9UKM9 306 aaKnown RBP9.52□□□□□ -0.89
CD48-202ENST00000368046 PADI1Q9ULC6 663 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 PLAGL1Q9UM63 463 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 CHMP2BQ9UQN3 213 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 UTP11Q9Y3A2 253 aaKnown RBP9.52□□□□□ -0.89
CD48-202ENST00000368046 KIF26BQ2KJY2 2108 aa9.52□□□□□ -0.89
CD48-202ENST00000368046 ADAMTS20P59510 1910 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 A0A0J9YY10 115 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 LOC101059948A0A1B0GTJ6 334 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 GFYI3L273 518 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 EIF3FO00303 357 aaPredicted RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 EIF3HO15372 352 aaKnown RBP eCLIP9.51□□□□□ -0.89
CD48-202ENST00000368046 ZBTB14O43829 449 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 PRICKLE3O43900 615 aaPredicted RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 PSIP1O75475 530 aaKnown RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 FKBP9O95302 570 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 NTRK1P04629 796 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 F7P08709 466 aaPredicted RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 MPC1LP0DKB6 136 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 ENO3P13929 434 aaPredicted RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 PVRP15151 417 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 PKLRP30613 574 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 MPP1Q00013 466 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 CKAP4Q07065 602 aaKnown RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 SRSF6Q13247 344 aaKnown RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 SF1Q15637 639 aaKnown RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 GPR19Q15760 415 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 CCSMST1Q4G0I0 132 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 STEAP4Q687X5 459 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 TRMT10BQ6PF06 316 aaKnown RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 CYS1Q717R9 158 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 ANKMY2Q8IV38 441 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 PALM2Q8IXS6 379 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 ZBED8Q8IZ13 594 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 C2orf73Q8N5S3 287 aaPredicted RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 GALNT6Q8NCL4 622 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 FBXO15Q8NCQ5 510 aaPredicted RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 LSM14AQ8ND56 463 aaKnown RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 OR9A1PQ8NGU1 263 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 HMGCLL1Q8TB92 370 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 PYROXD1Q8WU10 500 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 ASB11Q8WXH4 323 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 ZUFSPQ96AP4 578 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 KIAA1143Q96AT1 154 aaPredicted RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 WBP1Q96G27 269 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 CFAP36Q96G28 342 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 SLC45A3Q96JT2 553 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 UBL7Q96S82 380 aaPredicted RBP9.51□□□□□ -0.89
CD48-202ENST00000368046 GPR21Q99679 349 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 RAB17Q9H0T7 212 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 FANCEQ9HB96 536 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 TAS2R13Q9NYV9 303 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 CIDEBQ9UHD4 219 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 NBEAQ8NFP9 2946 aa9.51□□□□□ -0.89
CD48-202ENST00000368046 TARM1B6A8C7 271 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 KIF2AO00139 706 aaPredicted RBP9.5□□□□□ -0.89
CD48-202ENST00000368046 SCRG1O75711 98 aa9.5□□□□□ -0.89
CD48-202ENST00000368046 TIAF1O95411 115 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms