RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 KCNC1P48547 511 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 POLR2JP52435 117 aaKnown RBP11.28□□□□□ -0.6
USF1-201ENST00000368019 OCA2Q04671 838 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 CHRNB3Q05901 458 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 IL10RBQ08334 325 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 TRAF2Q12933 501 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 BNIP3Q12983 259 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 NEDD8Q15843 81 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 PLK5Q496M5 336 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 MARC1Q5VT66 337 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 ALG1LQ6GMV1 187 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 GLYATQ6IB77 296 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 SYT13Q7L8C5 426 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 CPA6Q8N4T0 437 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 NKAPQ8N5F7 415 aaKnown RBP11.28□□□□□ -0.6
USF1-201ENST00000368019 OR56A4Q8NGH8 313 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 DNAJB8Q8NHS0 232 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 FAM110BQ8TC76 370 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 FBLIM1Q8WUP2 373 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 EDEM1Q92611 657 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 FCRL2Q96LA5 508 aaPredicted RBP11.28□□□□□ -0.6
USF1-201ENST00000368019 ING2Q9H160 280 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 DUSP15Q9H1R2 295 aaPredicted RBP11.28□□□□□ -0.6
USF1-201ENST00000368019 MAGIXQ9H6Y5 334 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 NTN4Q9HB63 628 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 GMPR2Q9P2T1 348 aaKnown RBP11.28□□□□□ -0.6
USF1-201ENST00000368019 DNAJB9Q9UBS3 223 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 TDRKHQ9Y2W6 561 aaKnown RBP11.28□□□□□ -0.6
USF1-201ENST00000368019 COMMD10Q9Y6G5 202 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 HSPE1-MOB4S4R3N1 261 aa11.28□□□□□ -0.6
USF1-201ENST00000368019 PLXND1Q9Y4D7 1925 aa11.27□□□□□ -0.6
USF1-201ENST00000368019 ASCC3Q8N3C0 2202 aaKnown RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 IGLV3-10A0A075B6K4 115 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 TRAV19A0A0A6YYK7 116 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 C2orf78A6NCI8 922 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 SLC22A1O15245 554 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 CD3EAPO15446 510 aaKnown RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 TPST1O60507 370 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 CNOT3O75175 753 aaKnown RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 UGT2B11O75310 529 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 GMNNO75496 209 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 CRCPO75575 148 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 ZNF182P17025 639 aaPredicted RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 JAK1P23458 1154 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 SERPINB10P48595 397 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 HNRNPFP52597 415 aaKnown RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 STC1P52823 247 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 CDH13P55290 713 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 YBEYP58557 167 aaPredicted RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 CXCR4P61073 352 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 ZXDBP98169 803 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 TIAL1Q01085 375 aaKnown RBP eCLIP11.27□□□□□ -0.61
USF1-201ENST00000368019 RAD51Q06609 339 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 PWP1Q13610 501 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 CAPRIN1Q14444 709 aaKnown RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 OR4D1Q15615 310 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 BCL2A1Q16548 175 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 GEN1Q17RS7 908 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 GAB4Q2WGN9 574 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 PLA2G4EQ3MJ16 856 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 C6orf141Q5SZD1 244 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 STPG1Q5TH74 334 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 IL31Q6EBC2 164 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 ZNF549Q6P9A3 640 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 XKR5Q6UX68 686 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 SPATA2LQ8IUW3 424 aaPredicted RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 ZC3H7AQ8IWR0 971 aaKnown RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 ZNF683Q8IZ20 524 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 OFCC1Q8IZS5 231 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 SPARTQ8N0X7 666 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 SLC15A4Q8N697 577 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 ZNF555Q8NEP9 628 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 ABHD11Q8NFV4 315 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 RPLP0P6Q8NHW5 317 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 ARRDC2Q8TBH0 407 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 BRSK1Q8TDC3 778 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 EFHD2Q96C19 240 aaPredicted RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 SLC39A13Q96H72 371 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 SPATA17Q96L03 361 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 CEP295NLQ96MC4 621 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 HHIPQ96QV1 700 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 ZNF382Q96SR6 550 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 RBM4BQ9BQ04 359 aaKnown RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 RBM4Q9BWF3 364 aaKnown RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 LINC00597Q9H2U6 94 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 NOL6Q9H6R4 1146 aaKnown RBP11.27□□□□□ -0.61
USF1-201ENST00000368019 FANCEQ9HB96 536 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 AKIP1Q9NQ31 210 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 NECTIN3Q9NQS3 549 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 FBXO8Q9NRD0 319 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 CATSPERZQ9NTU4 200 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 TMEM30AQ9NV96 361 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 SMPD4Q9NXE4 827 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 ERVW-1Q9UQF0 538 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 SNX5Q9Y5X3 404 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 ST14Q9Y5Y6 855 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 WNT6Q9Y6F9 365 aa11.27□□□□□ -0.61
USF1-201ENST00000368019 TNRC6BQ9UPQ9 1833 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms