RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 MPP2Q14168 576 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 GPR18Q14330 331 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 NR0B2Q15466 257 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 PFKFB4Q16877 469 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 KLHL35Q6PF15 583 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 TMEM26Q6ZUK4 368 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 LRRC70Q7Z2Q7 622 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 TRIM42Q8IWZ5 723 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 SLC35F3Q8IY50 421 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 SYTL1Q8IYJ3 562 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 HMGCLL1Q8TB92 370 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 RAB3IL1Q8TBN0 382 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 LCN9Q8WX39 176 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 NAT6Q93015 286 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 RHBDF1Q96CC6 855 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 C12orf65Q9H3J6 166 aaKnown RBP15.18■□□□□ 0.02
CNIH4-204ENST00000366860 EPB41L1Q9H4G0 881 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 INTS9Q9NV88 658 aaKnown RBP15.18■□□□□ 0.02
CNIH4-204ENST00000366860 OR6C2Q9NZP2 312 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 BOLA1Q9Y3E2 137 aa15.18■□□□□ 0.02
CNIH4-204ENST00000366860 ASCC3Q8N3C0 2202 aaKnown RBP15.18■□□□□ 0.02
CNIH4-204ENST00000366860 RIF1Q5UIP0 2472 aaKnown RBP15.17■□□□□ 0.02
CNIH4-204ENST00000366860 FAM186AA6NE01 2351 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 RHPN2P1A8MT19 583 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 MATN2O00339 956 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 DLX3O60479 287 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 BPGMP07738 259 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 CHN1P15882 459 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 GLB1P16278 677 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 GGT5P36269 586 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 KCNC1P48547 511 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 DUSP3P51452 185 aaPredicted RBP15.17■□□□□ 0.02
CNIH4-204ENST00000366860 DNAJB13P59910 316 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 HERVK_113P63132 956 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 GRB7Q14451 532 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 CYP2A13Q16696 494 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 CCSMST1Q4G0I0 132 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 AGTRAPQ6RW13 159 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 MBOAT1Q6ZNC8 495 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 ZNF438Q7Z4V0 828 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 AMIGO1Q86WK6 493 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 OR2L8Q8NGY9 312 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 PPP1R14CQ8TAE6 165 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 ZNF480Q8WV37 535 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 L3HYPDHQ96EM0 354 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 SLC38A3Q99624 504 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 PAIP2Q9BPZ3 127 aaKnown RBP15.17■□□□□ 0.02
CNIH4-204ENST00000366860 ERVK-6Q9BXR3 956 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 CCDC177Q9NQR7 707 aaPredicted RBP15.17■□□□□ 0.02
CNIH4-204ENST00000366860 OXSMQ9NWU1 459 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 PTBP2Q9UKA9 531 aaKnown RBP15.17■□□□□ 0.02
CNIH4-204ENST00000366860 ICKQ9UPZ9 632 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 STK38LQ9Y2H1 464 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 FRYLO94915 3013 aa15.17■□□□□ 0.02
CNIH4-204ENST00000366860 PCM1Q15154 2024 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 TRBV23OR9-2A0A075B6M9 112 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 TRIM38O00635 465 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 SIGLEC6O43699 453 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 TRIM13O60858 407 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 STK16O75716 305 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 RPS17P08708 135 aaKnown RBP15.16■□□□□ 0.02
CNIH4-204ENST00000366860 NEFHP12036 1026 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 PNLIPP16233 465 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 SERPINB5P36952 375 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 GPR3P46089 330 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 SLC6A12P48065 614 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 ATP1A2P50993 1020 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 WDR4P57081 412 aaKnown RBP15.16■□□□□ 0.02
CNIH4-204ENST00000366860 TBPL1P62380 186 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 NHLH1Q02575 133 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 NR1D2Q14995 579 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 PCBP2Q15366 365 aaKnown RBP eCLIP15.16■□□□□ 0.02
CNIH4-204ENST00000366860 CFAP157Q5JU67 520 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 CAPN13Q6MZZ7 669 aaPredicted RBP15.16■□□□□ 0.02
CNIH4-204ENST00000366860 TAX1BP1Q86VP1 789 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 OOSP2Q86WS3 158 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 NUDCD3Q8IVD9 361 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 C10orf107Q8IVU9 208 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 KLHDC8AQ8IYD2 350 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 EID2Q8N6I1 236 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 OR56A3Q8NH54 315 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 SMPDL3AQ92484 453 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 SLC22A18Q96BI1 424 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 PHF21BQ96EK2 531 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 MED8Q96G25 268 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 APOLD1Q96LR9 279 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 TMEM237Q96Q45 408 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 TMEM79Q9BSE2 394 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 MENTQ9BUN1 341 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 C1QTNF3Q9BXJ4 246 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 PCBD2Q9H0N5 130 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 SRMSQ9H3Y6 488 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 MLXIPLQ9NP71 852 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 PARD6AQ9NPB6 346 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 OPTCQ9UBM4 332 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 PADI4Q9UM07 663 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 PLAGL1Q9UM63 463 aa15.16■□□□□ 0.02
CNIH4-204ENST00000366860 GVINP1Q7Z2Y8 2422 aa15.15■□□□□ 0.02
CNIH4-204ENST00000366860 CDX4O14627 284 aaPredicted RBP15.15■□□□□ 0.02
CNIH4-204ENST00000366860 SNUPNO95149 360 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms