RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 TXLNGQ9NUQ3 528 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 NSMCE4AQ9NXX6 385 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 TAS2R13Q9NYV9 303 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 TXNDC16Q9P2K2 825 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 CROTQ9UKG9 612 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 PADI1Q9ULC6 663 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 CORO1CQ9ULV4 474 aaPredicted RBP9.01□□□□□ -0.97
MRPL55-216ENST00000366744 SRPK3Q9UPE1 567 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 CDYLQ9Y232 598 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 PADI2Q9Y2J8 665 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 SSUH2Q9Y2M2 353 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 TLN1Q9Y490 2541 aaKnown RBP9.01□□□□□ -0.97
MRPL55-216ENST00000366744 KIF2AO00139 706 aaPredicted RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 EIF3FO00303 357 aaPredicted RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 KATNA1O75449 491 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 BANF1O75531 89 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 OR2B3O76000 313 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 CCNDBP1O95273 360 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 SYF2O95926 243 aaKnown RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 ERVK-10P10266 1014 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 PRKAR1AP10644 381 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 SFTPCP11686 197 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 PVRP15151 417 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 ZNF28P17035 718 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 AGXTP21549 392 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 RPA3P35244 121 aaPredicted RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 HSD17B2P37059 387 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 ELK3P41970 407 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 MPP1Q00013 466 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 CDC20Q12834 499 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 ILF2Q12905 390 aaKnown RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 PDIA2Q13087 525 aaKnown RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 SRSF6Q13247 344 aaKnown RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 PDAP1Q13442 181 aaKnown RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 DNASE1L3Q13609 305 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 CUL1Q13616 776 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 SF1Q15637 639 aaKnown RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 KYNUQ16719 465 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 KLHL38Q2WGJ6 581 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 ZC3H12BQ5HYM0 836 aaKnown RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 C8orf74Q6P047 294 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 BORAQ6PGQ7 559 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 FBXO38Q6PIJ6 1188 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 NEK10Q6ZWH5 1172 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 ZBED8Q8IZ13 594 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 UNC5BQ8IZJ1 945 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 MYO1HQ8N1T3 1032 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 C17orf53Q8N3J3 647 aaPredicted RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 SPATA4Q8NEY3 305 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 DENND1AQ8TEH3 1009 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 SLC39A7Q92504 469 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 ZNF592Q92610 1267 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 CDKL2Q92772 493 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 INPP5DQ92835 1189 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 MR1Q95460 341 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 ZNF501Q96CX3 271 aaPredicted RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 WBP1Q96G27 269 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 OR2A14Q96R47 310 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 GPR21Q99679 349 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 DPH2Q9BQC3 489 aaPredicted RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 NDC1Q9BTX1 674 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 DPH5Q9H2P9 285 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 UTP6Q9NYH9 597 aaKnown RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 WHRNQ9P202 907 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 KLHL42Q9P2K6 505 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 CIDEBQ9UHD4 219 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 RUVBL2Q9Y230 463 aaKnown RBP9□□□□□ -0.97
MRPL55-216ENST00000366744 AP1M2Q9Y6Q5 423 aa9□□□□□ -0.97
MRPL55-216ENST00000366744 CCDC88CQ9P219 2028 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 LOC101059948A0A1B0GTJ6 334 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 ZSCAN9O15535 394 aaPredicted RBP8.99□□□□□ -0.97
MRPL55-216ENST00000366744 ZBTB14O43829 449 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 C1orf105O95561 183 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 NTRK1P04629 796 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 MPC1LP0DKB6 136 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 MAGP20916 626 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 OAS2P29728 719 aaKnown RBP8.99□□□□□ -0.97
MRPL55-216ENST00000366744 CMPK1P30085 196 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 SKIV2L2P42285 1042 aaKnown RBP8.99□□□□□ -0.97
MRPL55-216ENST00000366744 CCR10P46092 362 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 RPL21P46778 160 aaKnown RBP8.99□□□□□ -0.97
MRPL55-216ENST00000366744 CARSP49589 748 aaKnown RBP8.99□□□□□ -0.97
MRPL55-216ENST00000366744 CLCN7P51798 805 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 SLC12A2P55011 1212 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 CAV1Q03135 178 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 SP140Q13342 867 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 ARHGAP19Q14CB8 494 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 DEFB110Q30KQ9 67 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 HP1BP3Q5SSJ5 553 aaPredicted RBP8.99□□□□□ -0.97
MRPL55-216ENST00000366744 THEMIS2Q5TEJ8 643 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 FAM45BPQ6NSW5 357 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 C16orf46Q6P387 395 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 CDHR3Q6ZTQ4 885 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 ANKMY2Q8IV38 441 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 CNTN4Q8IWV2 1026 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 SYTL1Q8IYJ3 562 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 AGGF1Q8N302 714 aaeCLIP8.99□□□□□ -0.97
MRPL55-216ENST00000366744 C2orf73Q8N5S3 287 aaPredicted RBP8.99□□□□□ -0.97
MRPL55-216ENST00000366744 GPATCH11Q8N954 259 aa8.99□□□□□ -0.97
MRPL55-216ENST00000366744 C2CD4AQ8NCU7 369 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms