RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 CTRCQ99895 268 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 AARSD1Q9BTE6 412 aaKnown RBP7.97□□□□□ -1.13
MRPL55-211ENST00000366738 DDA1Q9BW61 102 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 RHOJQ9H4E5 214 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 TRIM39Q9HCM9 518 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 NSMCE4AQ9NXX6 385 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 SLC39A1Q9NY26 324 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 PDP2Q9P2J9 529 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 PSMC3IPQ9P2W1 217 aaPredicted RBP7.97□□□□□ -1.13
MRPL55-211ENST00000366738 FAM8A1Q9UBU6 413 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 TBC1D29Q9UFV1 150 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 TBK1Q9UHD2 729 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 GNPTGQ9UJJ9 305 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 PILRAQ9UKJ1 303 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 VPS4AQ9UN37 437 aa7.97□□□□□ -1.13
MRPL55-211ENST00000366738 MTO1Q9Y2Z2 717 aaKnown RBP7.97□□□□□ -1.13
MRPL55-211ENST00000366738 MRPS18BQ9Y676 258 aaKnown RBP7.97□□□□□ -1.13
MRPL55-211ENST00000366738 A8MU76 341 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 CFAP99D6REC4 459 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 AGPSO00116 658 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 CAPN5O15484 640 aaPredicted RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 GRID2O43424 1007 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 VEGFDO43915 354 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 AP2A2O94973 939 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 CLDN1O95832 211 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 ESR1P03372 595 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 PDGFAP04085 211 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 INHBAP08476 426 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 ACP5P13686 325 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 PKMP14618 531 aaKnown RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 SAT1P21673 171 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 FDXRP22570 491 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 MSH2P43246 934 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 FASLGP48023 281 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 CLCN7P51798 805 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 ADARP55265 1226 aaKnown RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 IFFO1Q0D2I5 559 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 GTF2H3Q13889 308 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 ZNF658BQ4V348 819 aaPredicted RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 CEP85LQ5SZL2 805 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 GRTP1Q5TC63 336 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 MROH9Q5TGP6 573 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 PTRHD1Q6GMV3 140 aaKnown RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 TMEM220Q6QAJ8 160 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 ADGRD1Q6QNK2 874 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 FAM83HQ6ZRV2 1179 aaPredicted RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 ASB18Q6ZVZ8 466 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 CHST15Q7LFX5 561 aaPredicted RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 TIPARPQ7Z3E1 657 aaKnown RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 CEP97Q8IW35 865 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 SRRM1Q8IYB3 904 aaKnown RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 EFCAB3Q8N7B9 438 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 SIDT2Q8NBJ9 832 aaKnown RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 GALNT11Q8NCW6 608 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 AGBL5Q8NDL9 886 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 GABPB2Q8TAK5 448 aaPredicted RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 CD200R1Q8TD46 325 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 KIAA1143Q96AT1 154 aaPredicted RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 PHF12Q96QT6 1004 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 TCF12Q99081 682 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 ZCCHC2Q9C0B9 1178 aaKnown RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 ZNF768Q9H5H4 540 aaKnown RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 APMAPQ9HDC9 416 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 PRDM8Q9NQV8 689 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 TXNDC16Q9P2K2 825 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 SLC23A2Q9UGH3 650 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 FETUBQ9UGM5 382 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 SLC24A2Q9UI40 661 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 TSR3Q9UJK0 312 aaKnown RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 ZNF180Q9UJW8 692 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 KCNK6Q9Y257 313 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 TNRC6AQ8NDV7 1962 aaKnown RBP7.96□□□□□ -1.14
MRPL55-211ENST00000366738 AKAP9Q99996 3911 aa7.96□□□□□ -1.14
MRPL55-211ENST00000366738 TLDC2A0PJX2 215 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 TTLL8A6PVC2 850 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 TRIM49D1C9J1S8 452 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 MAP2K7O14733 419 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 RASGRF2O14827 1237 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 PHGDHO43175 533 aaKnown RBP7.95□□□□□ -1.14
MRPL55-211ENST00000366738 WISP3O95389 354 aaPredicted RBP7.95□□□□□ -1.14
MRPL55-211ENST00000366738 ALDOAP04075 364 aaKnown RBP7.95□□□□□ -1.14
MRPL55-211ENST00000366738 RALBP11234 206 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 TCN2P20062 427 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 CCR7P32248 378 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 CSTF2P33240 577 aaKnown RBP eCLIP7.95□□□□□ -1.14
MRPL55-211ENST00000366738 SPRP35270 261 aaPredicted RBP7.95□□□□□ -1.14
MRPL55-211ENST00000366738 PPARGP37231 505 aaPredicted RBP7.95□□□□□ -1.14
MRPL55-211ENST00000366738 MAGEA12P43365 314 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 PREPP48147 710 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 TAS2R39P59534 338 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 IRF9Q00978 393 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 TRA2AQ13595 282 aaKnown RBP eCLIP7.95□□□□□ -1.14
MRPL55-211ENST00000366738 BOP1Q14137 746 aaKnown RBP7.95□□□□□ -1.14
MRPL55-211ENST00000366738 NFE2L1Q14494 772 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 ZKSCAN8Q15776 578 aaPredicted RBP7.95□□□□□ -1.14
MRPL55-211ENST00000366738 CLPPQ16740 277 aaPredicted RBP7.95□□□□□ -1.14
MRPL55-211ENST00000366738 KRT71Q3SY84 523 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 SNAP47Q5SQN1 464 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 DCAF12Q5T6F0 453 aa7.95□□□□□ -1.14
MRPL55-211ENST00000366738 FAM45BPQ6NSW5 357 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms