RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ENPP2Q13822 863 aa19.88■□□□□ 0.77
CDC42BPB-201ENST00000361246 SLC22A8Q8TCC7 542 aa19.88■□□□□ 0.77
CDC42BPB-201ENST00000361246 SLC44A1Q8WWI5 657 aa19.88■□□□□ 0.77
CDC42BPB-201ENST00000361246 ARRB1P49407 418 aaPredicted RBP19.88■□□□□ 0.77
CDC42BPB-201ENST00000361246 PTGES3Q15185 160 aaKnown RBP19.88■□□□□ 0.77
CDC42BPB-201ENST00000361246 PAQR3Q6TCH7 311 aa19.88■□□□□ 0.77
CDC42BPB-201ENST00000361246 SLC9B2Q86UD5 537 aa19.88■□□□□ 0.77
CDC42BPB-201ENST00000361246 STRADBQ9C0K7 418 aa19.88■□□□□ 0.77
CDC42BPB-201ENST00000361246 IFT46Q9NQC8 304 aa19.88■□□□□ 0.77
CDC42BPB-201ENST00000361246 GSC2O15499 205 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 FOLH1Q04609 750 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 TIMM50Q3ZCQ8 353 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 C6orf52Q5T4I8 152 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 TNFRSF25Q93038 417 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 COPS4Q9BT78 406 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 TTTY10Q9BZA0 68 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 PNPLA8Q9NP80 782 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 RPP14O95059 124 aaKnown RBP19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 PTGER3P43115 390 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 KHKP50053 298 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 ITPRIPL2Q3MIP1 535 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 RIMKLBQ9ULI2 386 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 A6NL46 340 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 IRAK2O43187 625 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 RPS27LQ71UM5 84 aaKnown RBP19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 KIAA1143Q96AT1 154 aaPredicted RBP19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 OMA1Q96E52 524 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 MMABQ96EY8 250 aaPredicted RBP19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 SDCBP2Q9H190 292 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 FZD8Q9H461 694 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 UTS2RQ9UKP6 389 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 FAM237AA0A1B0GTK4 181 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 SMAD9O15198 467 aaKnown RBP19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 IFNW1P05000 195 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 STARP49675 285 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 ARHGDIBP52566 201 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 CHN2P52757 468 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 SMCO1Q147U7 214 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 AAK1Q2M2I8 961 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 ZNF792Q3KQV3 632 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 TMPRSS11AQ6ZMR5 421 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 GPAT4Q86UL3 456 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 C8orf48Q96LL4 319 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 HMG20AQ9NP66 347 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 SERTAD3Q9UJW9 196 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 AREL1O15033 823 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 FHP07954 510 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 GNAZP19086 355 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 GRIA1P42261 906 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 GDF5P43026 501 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 TARDBPQ13148 414 aaKnown RBP eCLIP19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 ROBO3Q96MS0 1386 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 PI15O43692 258 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 ELF3P78545 371 aaPredicted RBP19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 IL18R1Q13478 541 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 HMGN2P46Q86SG4 172 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 PHOSPHO1Q8TCT1 267 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 NUSAP1Q9BXS6 441 aaKnown RBP19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 B3GNT4Q9C0J1 378 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 GPR34Q9UPC5 381 aa19.87■□□□□ 0.77
CDC42BPB-201ENST00000361246 LIPEQ05469 1076 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 CARD17Q5XLA6 110 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 NANOGNBQ7Z5D8 188 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 CDH24Q86UP0 819 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 AJAP1Q9UKB5 411 aaPredicted RBP19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 FADS2P1A8MWK0 482 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 ABHD2P08910 425 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 CAND1Q86VP6 1230 aaKnown RBP19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 TVP23BQ9NYZ1 205 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 GNEQ9Y223 722 aaKnown RBP19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 NR2F6P10588 404 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 SLC26A3P40879 764 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 CCT3P49368 545 aaKnown RBP19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 TAB1Q15750 504 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 PDE12Q6L8Q7 609 aaKnown RBP19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 ZDHHC3Q9NYG2 299 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 WBP11Q9Y2W2 641 aaKnown RBP19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 KCTD3Q9Y597 815 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 HEPACAM2A8MVW5 462 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 ZNF432O94892 652 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 SEMA3AQ14563 771 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 HAPLN3Q96S86 360 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 SERINC1Q9NRX5 453 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 COL14A1Q05707 1796 aaKnown RBP19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 SNX3O60493 162 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 RB1P06400 928 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 ADGRE1Q14246 886 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 COX4I2Q96KJ9 171 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 SH3BGRL2Q9UJC5 107 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 TLL2Q9Y6L7 1015 aa19.86■□□□□ 0.77
CDC42BPB-201ENST00000361246 MTMR11A4FU01 709 aa19.85■□□□□ 0.77
CDC42BPB-201ENST00000361246 UPK3BL1B0FP48 263 aa19.85■□□□□ 0.77
CDC42BPB-201ENST00000361246 UPK3BL2E5RIL1 263 aa19.85■□□□□ 0.77
CDC42BPB-201ENST00000361246 OPN1SWP03999 348 aa19.85■□□□□ 0.77
CDC42BPB-201ENST00000361246 CLDN19Q8N6F1 224 aa19.85■□□□□ 0.77
CDC42BPB-201ENST00000361246 ZFRQ96KR1 1074 aaKnown RBP19.85■□□□□ 0.77
CDC42BPB-201ENST00000361246 PARPBPQ9NWS1 579 aa19.85■□□□□ 0.77
CDC42BPB-201ENST00000361246 RCOR3Q9P2K3 495 aaPredicted RBP19.85■□□□□ 0.77
CDC42BPB-201ENST00000361246 QPCTQ16769 361 aa19.85■□□□□ 0.77
CDC42BPB-201ENST00000361246 TRMT10BQ6PF06 316 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms