RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ARNTLO00327 626 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 NR5A2O00482 541 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 FBP2O00757 339 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 KMOO15229 486 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 RAD51BO15315 384 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 KLK8O60259 260 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 RNASEH2AO75792 299 aaKnown RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 POU2F2P09086 479 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 VCLP18206 1134 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 COL9A1P20849 921 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ITGB7P26010 798 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CSTF2P33240 577 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 GPR1P46091 355 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 TAS2R38P59533 333 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 HMGCS1Q01581 520 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 TBL3Q12788 808 aaKnown RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 FASTKQ14296 549 aaKnown RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 PON2Q15165 354 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 SF1Q15637 639 aaKnown RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CPSF6Q16630 551 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ITPRIPL2Q3MIP1 535 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 WDR45BQ5MNZ6 344 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 C6orf132Q5T0Z8 1188 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 PIP5KL1Q5T9C9 394 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 C1orf146Q5VVC0 180 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 FAM91A1Q658Y4 838 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 IL27RAQ6UWB1 636 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ERN2Q76MJ5 926 aaKnown RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ADAMTSL2Q86TH1 951 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 FUNDC1Q8IVP5 155 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 SLC22A15Q8IZD6 547 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 DSELQ8IZU8 1212 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 TRIML2Q8N7C3 387 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ZNF557Q8N988 423 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 FLCNQ8NFG4 579 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 METTL6Q8TCB7 284 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 BTN2A2Q8WVV5 523 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 VPS33AQ96AX1 596 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 EFHD2Q96C19 240 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 RHBDF1Q96CC6 855 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CMTM5Q96DZ9 223 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 NUS1Q96E22 293 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 DTD2Q96FN9 168 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 MED8Q96G25 268 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 COQ10AQ96MF6 247 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 NDEL1Q9GZM8 345 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 LMAN2LQ9H0V9 348 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 TTYH1Q9H313 450 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 TPK1Q9H3S4 243 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 TRPV4Q9HBA0 871 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 PRM3Q9NNZ6 103 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 PFDN4Q9NQP4 134 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 DYRK4Q9NR20 520 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 KCTD5Q9NXV2 234 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 NUDT4Q9NZJ9 180 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 GULP1Q9UBP9 304 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 PTBP2Q9UKA9 531 aaKnown RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 PSMD13Q9UNM6 376 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 OARD1Q9Y530 152 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ANGPTL3Q9Y5C1 460 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 KANSL1LA0AUZ9 987 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 EIF4E1BA6NMX2 242 aaKnown RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ARHGEF33A8MVX0 844 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 LOC730098B7Z3J9 87 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 SLCO1B7G3V0H7 640 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 STX16O14662 325 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 GIPC1O14908 333 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 AREL1O15033 823 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ZNF254O75437 659 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 TM7SF2O76062 418 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ESRRBO95718 433 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 PAK4O96013 591 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 EGFP01133 1207 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 APODP05090 189 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ZNF30P17039 623 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 EPORP19235 508 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CD53P19397 219 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 VARSP26640 1264 aaKnown RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CASP2P42575 452 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 TRAF3Q13114 568 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CAPRIN1Q14444 709 aaKnown RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 NFE2L1Q14494 772 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 PTCHD3Q3KNS1 767 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 VPS26BQ4G0F5 336 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 SYTL3Q4VX76 610 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 LYPLAL1Q5VWZ2 237 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ADNP2Q6IQ32 1131 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 PHYKPLQ8IUZ5 450 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CFAP206Q8IYR0 622 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 HDDC3Q8N4P3 179 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 TRAM1L1Q8N609 369 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 OR56A4Q8NGH8 313 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CLHC1Q8NHS4 586 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 PYDC1Q8WXC3 89 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 ULK4Q96C45 1275 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 GBP5Q96PP8 586 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CDRT15Q96T59 188 aa4.96□□□□□ -1.62
ATXN3-202ENST00000359366 CDCA3Q99618 268 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-202ENST00000359366 TRMOQ9BU70 441 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms