RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 ATG16L2Q8NAA4 619 aa8.07□□□□□ -1.12
CD46-205ENST00000358170 CYB5D2Q8WUJ1 264 aa8.07□□□□□ -1.12
CD46-205ENST00000358170 RHNO1Q9BSD3 238 aa8.07□□□□□ -1.12
CD46-205ENST00000358170 HEBP1Q9NRV9 189 aa8.07□□□□□ -1.12
CD46-205ENST00000358170 RIMKLBQ9ULI2 386 aa8.07□□□□□ -1.12
CD46-205ENST00000358170 PHF24Q9UPV7 400 aa8.07□□□□□ -1.12
CD46-205ENST00000358170 AGRPO00253 132 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 ANKRD28O15084 1053 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 INMTO95050 263 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 CCNA2P20248 432 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 PREPP48147 710 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 TM4SF4P48230 202 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 PPP3CCP48454 512 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 C21orf59P57076 290 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 HTRA3P83110 453 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 FPGSQ05932 587 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 CD47Q08722 323 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 SLC14A1Q13336 389 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 BROXQ5VW32 411 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 RBM23Q86U06 439 aaKnown RBP8.06□□□□□ -1.12
CD46-205ENST00000358170 MSRB3Q8IXL7 192 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 MICU2Q8IYU8 434 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 SNX19Q92543 992 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 NRBF2Q96F24 287 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 AMBRA1Q9C0C7 1298 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 CD320Q9NPF0 282 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 FAM118AQ9NWS6 357 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 INTS6Q9UL03 887 aaKnown RBP8.06□□□□□ -1.12
CD46-205ENST00000358170 ATP11BQ9Y2G3 1177 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 KLHL33A6NCF5 533 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 EVPLLA8MZ36 301 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 UPK1AO00322 258 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 SLC28A1O00337 649 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 NRG2O14511 850 aaPredicted RBP8.06□□□□□ -1.12
CD46-205ENST00000358170 CCL16O15467 120 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 OPN1SWP03999 348 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 ACRP10323 421 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 COX7A2P14406 83 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 TNFRSF1BP20333 461 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 MSH3P20585 1137 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 XPAP23025 273 aaPredicted RBP8.06□□□□□ -1.12
CD46-205ENST00000358170 PSMB9P28065 219 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 MAP2K4P45985 399 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 AP1S1P61966 158 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 NAE1Q13564 534 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 SMN1Q16637 294 aaKnown RBP8.06□□□□□ -1.12
CD46-205ENST00000358170 PLEKHG6Q3KR16 790 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 INO80DQ53TQ3 878 aaPredicted RBP8.06□□□□□ -1.12
CD46-205ENST00000358170 XKR6Q5GH73 641 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 COQ5Q5HYK3 327 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 GPRC6AQ5T6X5 926 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 ZNF697Q5TEC3 545 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 BORAQ6PGQ7 559 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 NECAB2Q7Z6G3 386 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 OR52J3Q8NH60 311 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 BPIFB1Q8TDL5 484 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 TSPEARQ8WU66 669 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 MAL2Q969L2 176 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 P2RY13Q9BPV8 354 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 KIF17Q9P2E2 1029 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 DNAJB9Q9UBS3 223 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 B4GALT6Q9UBX8 382 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 CCL26Q9Y258 94 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 OARD1Q9Y530 152 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 ANKRD36A6QL64 1941 aa8.06□□□□□ -1.12
CD46-205ENST00000358170 BOLA2-SMG1P6H3BVE0 249 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 AREL1O15033 823 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 TEX28O15482 410 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 HOXA2O43364 376 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 LHCGRP22888 699 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 EPHA2P29317 976 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 EMP3P54852 163 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 ADARB1P78563 741 aaKnown RBP8.05□□□□□ -1.12
CD46-205ENST00000358170 SMARCB1Q12824 385 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 CBX2Q14781 532 aaPredicted RBP8.05□□□□□ -1.12
CD46-205ENST00000358170 CTU2Q2VPK5 515 aaKnown RBP8.05□□□□□ -1.12
CD46-205ENST00000358170 PDE12Q6L8Q7 609 aaKnown RBP8.05□□□□□ -1.12
CD46-205ENST00000358170 NEK5Q6P3R8 708 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 GAREM2Q75VX8 874 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 TMEM150AQ86TG1 271 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 TRIM74Q86UV6 250 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 TMEM25Q86YD3 366 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 ZDHHC21Q8IVQ6 265 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 DCAF4L2Q8NA75 395 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 ZNF548Q8NEK5 533 aaPredicted RBP8.05□□□□□ -1.12
CD46-205ENST00000358170 OR2AP1Q8NGE2 309 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 REXO4Q9GZR2 422 aaKnown RBP8.05□□□□□ -1.12
CD46-205ENST00000358170 BRD9Q9H8M2 597 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 ZDHHC4Q9NPG8 344 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 HCFC1R1Q9NWW0 138 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 INSL5Q9Y5Q6 135 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 LOC100130705A0A1B0GUX0 176 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 GNG14A0A1W2PPG7 69 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 TMEM202A6NGA9 273 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 FZD6O60353 706 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 NUDT7P0C024 238 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 DCTP40126 519 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 RECQLP46063 649 aaPredicted RBP8.05□□□□□ -1.12
CD46-205ENST00000358170 TLE2Q04725 743 aa8.05□□□□□ -1.12
CD46-205ENST00000358170 GRIK2Q13002 908 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms