RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 A6NCN8 305 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 GPR37L1O60883 481 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 WDR47O94967 919 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 CELA2BP08218 269 aaPredicted RBP17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 ITPKAP23677 461 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 ERVPABLB-1P60509 514 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 TRAF3Q13114 568 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 NAE1Q13564 534 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 RPE65Q16518 533 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 UGT3A2Q3SY77 523 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 SLC9B1Q4ZJI4 515 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 METTL21CQ5VZV1 264 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 LETMD1Q6P1Q0 360 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 ABRAXAS1Q6UWZ7 409 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 WASH2PQ6VEQ5 465 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 GPRIN3Q6ZVF9 776 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 LPCAT2Q7L5N7 544 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 PHACTR4Q8IZ21 702 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 RGL4Q8IZJ4 473 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 DCBLD1Q8N8Z6 715 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 OR56A3Q8NH54 315 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 MAELQ96JY0 434 aaKnown RBP17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 CDK15Q96Q40 435 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 NUF2Q9BZD4 464 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 NMUR2Q9GZQ4 415 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 TRIT1Q9H3H1 467 aaKnown RBP17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 WASH6PQ9NQA3 447 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 IMP3Q9NV31 184 aaKnown RBP17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 INTS7Q9NVH2 962 aaKnown RBP17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 PCOLCE2Q9UKZ9 415 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 PLAGL1Q9UM63 463 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 SLC12A4Q9UP95 1085 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 SLC22A14Q9Y267 594 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 USP34Q70CQ2 3546 aa17.62■□□□□ 0.41
SMARCD3-202ENST00000356800 PRAMEF33A0A0G2JMD5 474 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 FCHO1O14526 889 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 ESRRBO95718 433 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 INHBCP55103 352 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 PDCD2Q16342 344 aaPredicted RBP17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 KANK2Q63ZY3 851 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 LRRC56Q8IYG6 542 aaPredicted RBP17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 TBC1D21Q8IYX1 336 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 MAGEC3Q8TD91 643 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 GAB3Q8WWW8 586 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 RAD51AP1Q96B01 352 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 IL17FQ96PD4 163 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 FERD3LQ96RJ6 166 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 MENTQ9BUN1 341 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 TCF7L2Q9NQB0 619 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 STK38LQ9Y2H1 464 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 TDRKHQ9Y2W6 561 aaKnown RBP17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 AZIN1O14977 448 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 OR4F21O95013 312 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 RPN2P04844 631 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 EPB42P16452 691 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 CSNK1EP49674 416 aaKnown RBP17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 PKNOX1P55347 436 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 ILF3Q12906 894 aaKnown RBP eCLIP17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 FASTKQ14296 549 aaKnown RBP17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 SPRED3Q2MJR0 410 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 WDR45BQ5MNZ6 344 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 PMS2CLQ68D20 193 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 THOC6Q86W42 341 aaKnown RBP17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 OR4F6Q8NGB9 312 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 OR4K3Q96R72 315 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 CCDC28BQ9BUN5 200 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 MEAF6Q9HAF1 191 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 SAR1AQ9NR31 198 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 DNAJC11Q9NVH1 559 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 ANGPTL3Q9Y5C1 460 aa17.61■□□□□ 0.41
SMARCD3-202ENST00000356800 E7ENX8 843 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 BCAT2O15382 392 aaPredicted RBP17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 HRO43593 1189 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 PRAMEF4O60810 478 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 OTCP00480 354 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 ERGP11308 486 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 MTHFD1P11586 935 aaKnown RBP17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 JUNDP17535 347 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 PIK3CGP48736 1102 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 PNLIPRP1P54315 467 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 NXPH1P58417 271 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 TAP2Q03519 686 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 BTKQ06187 659 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 DNAH14Q0VDD8 3507 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 PRAMEF9Q5VWM5 478 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 ACAD11Q709F0 780 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 SYTL1Q8IYJ3 562 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 SNX31Q8N9S9 440 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 MED8Q96G25 268 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 PPP1R36Q96LQ0 422 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 CAMK1GQ96NX5 476 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 NTMT1Q9BV86 223 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 LRRC61Q9BV99 259 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 ZNF624Q9P2J8 865 aaPredicted RBP17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 FBXO4Q9UKT5 387 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 TIMM22Q9Y584 194 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 DNAJC15Q9Y5T4 150 aa17.6■□□□□ 0.41
SMARCD3-202ENST00000356800 TMEM131Q92545 1883 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 GIPC1O14908 333 aa17.59■□□□□ 0.41
SMARCD3-202ENST00000356800 VILLO15195 856 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms