RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 SERHLQ9NQF3 203 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 HCFC1R1Q9NWW0 138 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 C1orf109Q9NX04 203 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 CCDC88CQ9P219 2028 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 HTR1AP08908 422 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 WEE1P30291 646 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 RPS14P62263 151 aaKnown RBP13.7□□□□□ -0.22
PGBD2-202ENST00000355360 DUS1LQ6P1R4 473 aaKnown RBP13.7□□□□□ -0.22
PGBD2-202ENST00000355360 DPY19L3Q6ZPD9 716 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 RNF168Q8IYW5 571 aaPredicted RBP13.7□□□□□ -0.22
PGBD2-202ENST00000355360 GOLM1Q8NBJ4 401 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 OR7A2PQ8NGA2 310 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 SNX19Q92543 992 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 THAP11Q96EK4 314 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 CSF3RQ99062 836 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 MTERF1Q99551 399 aaKnown RBP13.7□□□□□ -0.22
PGBD2-202ENST00000355360 TSEN34Q9BSV6 310 aaKnown RBP13.7□□□□□ -0.22
PGBD2-202ENST00000355360 CCDC90BQ9GZT6 254 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 PAIP1Q9H074 479 aaKnown RBP13.7□□□□□ -0.22
PGBD2-202ENST00000355360 FAM118AQ9NWS6 357 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 TMCO1Q9UM00 188 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 DGKBQ9Y6T7 804 aa13.7□□□□□ -0.22
PGBD2-202ENST00000355360 KIAA0100Q14667 2235 aaKnown RBP13.7□□□□□ -0.22
PGBD2-202ENST00000355360 TRBV5-4A0A0C4DH59 114 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 TRIM64A6NGJ6 449 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 hCG_2039718K7EN88 272 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 CREG1O75629 220 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 CLDN9O95484 217 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 PSMD7P51665 324 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 EPHB3P54753 998 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 MTA1Q13330 715 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 GTF2H3Q13889 308 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 RUNDC3AQ59EK9 446 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 XAF1Q6GPH4 301 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 LAIR2Q6ISS4 152 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 DOK6Q6PKX4 331 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 OR2AP1Q8NGE2 309 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 FAM120BQ96EK7 910 aaKnown RBP13.69□□□□□ -0.22
PGBD2-202ENST00000355360 ELOVL6Q9H5J4 265 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 KAT8Q9H7Z6 458 aaKnown RBP13.69□□□□□ -0.22
PGBD2-202ENST00000355360 SH3BP1Q9Y3L3 701 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 NINQ8N4C6 2090 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 HOXA2O43364 376 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 ALDH1A1P00352 501 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 ANXA5P08758 320 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 SDC1P18827 310 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 RPS3P23396 243 aaKnown RBP eCLIP13.69□□□□□ -0.22
PGBD2-202ENST00000355360 GSSP48637 474 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 MLLT10P55197 1068 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 SIM2Q14190 667 aaPredicted RBP13.69□□□□□ -0.22
PGBD2-202ENST00000355360 CCSMST1Q4G0I0 132 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 VTCN1Q7Z7D3 282 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 OR8J3Q8NGG0 315 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 COPS8Q99627 209 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 MRPL17Q9NRX2 175 aaKnown RBP13.69□□□□□ -0.22
PGBD2-202ENST00000355360 ABCG2Q9UNQ0 655 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 IGSF6O95976 241 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 SERPINA4P29622 427 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 HALP42357 657 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 HLCSP50747 726 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 CD47Q08722 323 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 MICU2Q8IYU8 434 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 CLECL1Q8IZS7 167 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 RNF217Q8TC41 542 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 DTNBP1Q96EV8 351 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 HTATIP2Q9BUP3 242 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 PAK1IP1Q9NWT1 392 aaPredicted RBP13.69□□□□□ -0.22
PGBD2-202ENST00000355360 B4GALT6Q9UBX8 382 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 STOML2Q9UJZ1 356 aa13.69□□□□□ -0.22
PGBD2-202ENST00000355360 MYO1GB0I1T2 1018 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 TULP3O75386 442 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 C1SP09871 688 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 EBLN1P0CF75 366 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 EPHA2P29317 976 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 ALDH4A1P30038 563 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 S100A3P33764 101 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 SH3BGRP55822 239 aaPredicted RBP13.68□□□□□ -0.22
PGBD2-202ENST00000355360 MACC1Q6ZN28 852 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 CEP68Q76N32 757 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 TMEM25Q86YD3 366 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 USP7Q93009 1102 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 SDCCAG3Q96C92 435 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 VWCEQ96DN2 955 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 TRMT2BQ96GJ1 504 aaKnown RBP13.68□□□□□ -0.22
PGBD2-202ENST00000355360 CAPNS2Q96L46 248 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 NTMT1Q9BV86 223 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 OSBPL6Q9BZF3 934 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 PRDM8Q9NQV8 689 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 TUBA8Q9NY65 449 aaPredicted RBP13.68□□□□□ -0.22
PGBD2-202ENST00000355360 WARS2Q9UGM6 360 aaKnown RBP13.68□□□□□ -0.22
PGBD2-202ENST00000355360 SLC28A1O00337 649 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 GFRA2O00451 464 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 PER2O15055 1255 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 YY2O15391 372 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 CPSF4O95639 269 aaKnown RBP13.68□□□□□ -0.22
PGBD2-202ENST00000355360 NPPAP01160 153 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 FTH1P02794 183 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 CRHBPP24387 322 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 AQP1P29972 269 aa13.68□□□□□ -0.22
PGBD2-202ENST00000355360 DCTP40126 519 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms