RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
EBF3-201ENST00000355311 TOR3AQ9H497 397 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 ARMC1Q9NVT9 282 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 IFT80Q9P2H3 777 aaPredicted RBP13.47□□□□□ -0.25
EBF3-201ENST00000355311 INTS6Q9UL03 887 aaKnown RBP13.47□□□□□ -0.25
EBF3-201ENST00000355311 GLYATL1P3A0A0U1RQE8 302 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 AREL1O15033 823 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 GMNNO75496 209 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 PDYNP01213 254 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 HSD17B1P14061 328 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 ZNF7P17097 686 aaPredicted RBP13.47□□□□□ -0.25
EBF3-201ENST00000355311 TNFRSF1BP20333 461 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 PTGER3P43115 390 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 DEFB103AP81534 67 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 LMAN2Q12907 356 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 INAVAQ3KP66 663 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 FAM26DQ5JW98 314 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 CCDC81Q6ZN84 652 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 ZFAND4Q86XD8 727 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 CNIH3Q8TBE1 160 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 SNX19Q92543 992 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 SEPT8Q92599 483 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 KCNJ9Q92806 393 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 MED8Q96G25 268 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 TMEM169Q96HH4 297 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 ALPK1Q96QP1 1244 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 C9orf16Q9BUW7 83 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 ATAD3AQ9NVI7 634 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 PCDHB14Q9Y5E9 798 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 PCDHGA3Q9Y5H0 932 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 HCFC2Q9Y5Z7 792 aa13.47□□□□□ -0.25
EBF3-201ENST00000355311 MICAL3Q7RTP6 2002 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 CCR7P32248 378 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 SLC26A3P40879 764 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 TUFMP49411 452 aaKnown RBP13.46□□□□□ -0.25
EBF3-201ENST00000355311 CHRNB3Q05901 458 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 CACNG1Q06432 222 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 SLC36A3Q495N2 470 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 CCSMST1Q4G0I0 132 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 IER5LQ5T953 404 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 OR4F3Q6IEY1 312 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 LCN8Q6JVE9 175 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 VTCN1Q7Z7D3 282 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 GPR156Q8NFN8 814 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 ADAMTS19Q8TE59 1207 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 KLF16Q9BXK1 252 aaPredicted RBP13.46□□□□□ -0.25
EBF3-201ENST00000355311 LRRC3Q9BY71 257 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 TRIM15Q9C019 465 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 LHPPQ9H008 270 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 LINC00597Q9H2U6 94 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 RASSF1Q9NS23 344 aa13.46□□□□□ -0.25
EBF3-201ENST00000355311 CNOT11Q9UKZ1 510 aaKnown RBP13.46□□□□□ -0.25
EBF3-201ENST00000355311 BBIP1A8MTZ0 92 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 RAD51BO15315 384 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 TBC1D4O60343 1298 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 EEDO75530 441 aaKnown RBP13.46□□□□□ -0.26
EBF3-201ENST00000355311 WDR47O94967 919 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 SERPINA1P01009 418 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 PGRP06401 933 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 DNAJB1P25685 340 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 EPHA2P29317 976 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 HMGCLP35914 325 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 PSMD8P48556 350 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 SLC13A2Q13183 592 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 AQP6Q13520 282 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 ATP6AP1Q15904 470 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 GAREM2Q75VX8 874 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 OR7A2PQ8NGA2 310 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 SLC13A3Q8WWT9 602 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 HTRA1Q92743 480 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 APIPQ96GX9 242 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 IGSF21Q96ID5 467 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 FAM126AQ9BYI3 521 aaPredicted RBP13.46□□□□□ -0.26
EBF3-201ENST00000355311 PARVBQ9HBI1 364 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 ITM2CQ9NQX7 267 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 DNMT3BQ9UBC3 853 aaKnown RBP13.46□□□□□ -0.26
EBF3-201ENST00000355311 PNMA8BQ9ULN7 279 aaPredicted RBP13.46□□□□□ -0.26
EBF3-201ENST00000355311 NUMA1Q14980 2115 aa13.46□□□□□ -0.26
EBF3-201ENST00000355311 FAM234BA2RU67 622 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 AQP12BA6NM10 295 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 H7C4K7 107 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 PGLSO95336 258 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 MATN4O95460 622 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 FTH1P02794 183 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 TGFBR1P36897 503 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 OTOP2Q7RTS6 562 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 AQP12AQ8IXF9 295 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 ABHD11Q8NFV4 315 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 ZFP90Q8TF47 636 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 SPATA17Q96L03 361 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 TMEM121BQ9BXQ6 578 aaPredicted RBP13.45□□□□□ -0.26
EBF3-201ENST00000355311 CEP44Q9C0F1 390 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 FBXO10Q9UK96 956 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 PCDHGA8Q9Y5G5 932 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 TMEM189-UBE2V1I3L0A0 370 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 PLK4O00444 970 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 CCL16O15467 120 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 NOL3O60936 208 aaKnown RBP13.45□□□□□ -0.26
EBF3-201ENST00000355311 ESR1P03372 595 aa13.45□□□□□ -0.26
EBF3-201ENST00000355311 PREPP48147 710 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms