RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CHERPQ8IWX8 916 aaKnown RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZFPM1Q8IX07 1006 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 ADAMTS6Q9UKP5 1117 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 PCDHGA11Q9Y5H2 935 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 ARL6IP5O75915 188 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 ANXA3P12429 323 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 FSHRP23945 695 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 RYKP34925 604 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF157P51786 506 aaPredicted RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 DSC2Q02487 901 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 PLEKHG7Q6ZR37 379 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 KIF18BQ86Y91 864 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 OR2L3Q8NG85 312 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 SUSD6Q92537 303 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 DNASE1L2Q92874 299 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 S100PBPQ96BU1 408 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 BARD1Q99728 777 aaKnown RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 HES2Q9Y543 173 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 VIRMAQ69YN4 1812 aaKnown RBP12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 MEGF6O75095 1541 aa12.47□□□□□ -0.41
SYNCRIP-201ENST00000355238 TCRBV7S3A2A0A539 114 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 A8MV72 311 aaPredicted RBP12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 CHRNA1P02708 482 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 PIK3CBP42338 1070 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 EIF2S3LQ2VIR3 472 aaKnown RBP12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 OGFRL1Q5TC84 451 aaPredicted RBP12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF367Q7RTV3 350 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 TMEM80Q96HE8 168 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 OR51V1Q9H2C8 321 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 CPNE5Q9HCH3 593 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 PAK1IP1Q9NWT1 392 aaPredicted RBP12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 MRPS33Q9Y291 106 aaKnown RBP12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 TNS2Q63HR2 1409 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 SRPRAP08240 638 aaKnown RBP12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 KHKP50053 298 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 HLCSP50747 726 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 NDST2P52849 883 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 HNRNPDQ14103 355 aaKnown RBP12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 NBPF12Q5TAG4 269 aaPredicted RBP12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 TMEM236Q5W0B7 351 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF563Q8TA94 476 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 EMID1Q96A84 441 aaPredicted RBP12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 EXOSC8Q96B26 276 aaKnown RBP12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 CXorf40BQ96DE9 158 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 HERC2P3Q9BVR0 1158 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 FLRT1Q9NZU1 646 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 ADGRB1O14514 1584 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 HK1P19367 917 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 PROZP22891 400 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 SLC30A6Q6NXT4 461 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 ZNF767PQ75MW2 155 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 OR2L5Q8NG80 312 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 BRD7Q9NPI1 651 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 COL20A1Q9P218 1284 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 EDARQ9UNE0 448 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 NFAT5O94916 1531 aa12.46□□□□□ -0.41
SYNCRIP-201ENST00000355238 CLIC1O00299 241 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 PRKCHP24723 683 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 GRK5P34947 590 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 SMSP52788 366 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 C15orf52Q6ZUT6 534 aaKnown RBP12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 KAT2AQ92830 837 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 TMEM203Q969S6 136 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 TRIM43Q96BQ3 446 aaPredicted RBP12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 FERD3LQ96RJ6 166 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 IL4I1Q96RQ9 567 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 MRIQ9BWK5 157 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 ENAMQ9NRM1 1142 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 MKS1Q9NXB0 559 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 ERCC6L2Q5T890 1561 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 A0A1W2PQ67 120 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 CXCL11O14625 94 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 DLX3O60479 287 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 GRSF1Q12849 480 aaKnown RBP eCLIP12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 PCLAFQ15004 111 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 EIPR1Q53HC9 387 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 CCBE1Q6UXH8 406 aaPredicted RBP12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 IL31RAQ8NI17 732 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 TSPEARQ8WU66 669 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF395Q9H8N7 513 aaPredicted RBP12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 TRIM36Q9NQ86 728 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 TIGARQ9NQ88 270 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 POLE4Q9NR33 117 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 FBXO10Q9UK96 956 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC27A6Q9Y2P4 619 aa12.46□□□□□ -0.42
SYNCRIP-201ENST00000355238 A0A075B6Q4 140 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZBTB7AO95365 584 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 APLP1P51693 650 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 AFF1P51825 1210 aaKnown RBP12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 GABARAPL2P60520 117 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 SEMA3AQ14563 771 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 SIDT2Q8NBJ9 832 aaKnown RBP12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 CMASQ8NFW8 434 aaPredicted RBP12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC35G5Q96KT7 338 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 TMEM168Q9H0V1 697 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 HTR3EA5X5Y0 456 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 KMOO15229 486 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 RFPL1O75677 317 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 PTTG1O95997 202 aa12.45□□□□□ -0.42
SYNCRIP-201ENST00000355238 MT-CYBP00156 380 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms