RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 ZNF292O60281 2723 aa23.51■■□□□ 1.35
HMGA2-201ENST00000354636 G3V2L1 256 aa23.5■■□□□ 1.35
HMGA2-201ENST00000354636 PKLRP30613 574 aa23.5■■□□□ 1.35
HMGA2-201ENST00000354636 HSD17B2P37059 387 aa23.5■■□□□ 1.35
HMGA2-201ENST00000354636 GPR3P46089 330 aa23.5■■□□□ 1.35
HMGA2-201ENST00000354636 PPM1FP49593 454 aaPredicted RBP23.5■■□□□ 1.35
HMGA2-201ENST00000354636 DUSP3P51452 185 aaPredicted RBP23.5■■□□□ 1.35
HMGA2-201ENST00000354636 SULT1C3Q6IMI6 304 aa23.5■■□□□ 1.35
HMGA2-201ENST00000354636 RAB42Q8N4Z0 105 aa23.5■■□□□ 1.35
HMGA2-201ENST00000354636 OR4E2Q8NGC2 313 aa23.5■■□□□ 1.35
HMGA2-201ENST00000354636 HMGCLL1Q8TB92 370 aa23.5■■□□□ 1.35
HMGA2-201ENST00000354636 ATL1Q8WXF7 558 aa23.5■■□□□ 1.35
HMGA2-201ENST00000354636 NAT6Q93015 286 aa23.5■■□□□ 1.35
HMGA2-201ENST00000354636 PTBP2Q9UKA9 531 aaKnown RBP23.5■■□□□ 1.35
HMGA2-201ENST00000354636 FAM221BA6H8Z2 402 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 H3BQF6 201 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 SMIM24O75264 130 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 GFAPP14136 432 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 CKMT2P17540 419 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 TAC1P20366 129 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 HPDP32754 393 aaPredicted RBP23.49■■□□□ 1.35
HMGA2-201ENST00000354636 PNLIPRP1P54315 467 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 ANKS6Q68DC2 871 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 AGTRAPQ6RW13 159 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 LRRC56Q8IYG6 542 aaPredicted RBP23.49■■□□□ 1.35
HMGA2-201ENST00000354636 TCAIMQ8N3R3 496 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 FBXO39Q8N4B4 442 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 CCDC63Q8NA47 563 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 LINC01555Q8NAE3 123 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 OR2L8Q8NGY9 312 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 TWSG1Q9GZX9 223 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 SRMSQ9H3Y6 488 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 OR6C2Q9NZP2 312 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 COPG2Q9UBF2 871 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 MID2Q9UJV3 735 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 TMCO1Q9UM00 188 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 PTPRZ1P23471 2315 aaPredicted RBP23.49■■□□□ 1.35
HMGA2-201ENST00000354636 E7ENX8 843 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 TAPBPO15533 448 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 DLX3O60479 287 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 S100BP04271 92 aaPredicted RBP23.49■■□□□ 1.35
HMGA2-201ENST00000354636 CPA3P15088 417 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 ATP5F1P24539 256 aaPredicted RBP23.49■■□□□ 1.35
HMGA2-201ENST00000354636 GGT5P36269 586 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 EPHA4P54764 986 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 ALDH18A1P54886 795 aaKnown RBP23.49■■□□□ 1.35
HMGA2-201ENST00000354636 TAP2Q03519 686 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 FASTKQ14296 549 aaKnown RBP23.49■■□□□ 1.35
HMGA2-201ENST00000354636 PFKFB4Q16877 469 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 ZYG11AQ6WRX3 759 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 PIP4P1Q86T03 277 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 SYTL1Q8IYJ3 562 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 LMNTD1Q8N9Z9 388 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 CCDC74AQ96AQ1 378 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 SELENOSQ9BQE4 189 aa23.49■■□□□ 1.35
HMGA2-201ENST00000354636 ZNF839A8K0R7 811 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 A8MT66 165 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 DHRS4L1P0CG22 281 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 MYL2P10916 166 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 ALDH4A1P30038 563 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 NFKB2Q00653 900 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 SETDB1Q15047 1291 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 C18orf21Q32NC0 220 aaPredicted RBP23.48■■□□□ 1.35
HMGA2-201ENST00000354636 PERM1Q5SV97 790 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 EFL1Q7Z2Z2 1120 aaKnown RBP23.48■■□□□ 1.35
HMGA2-201ENST00000354636 ANKRD42Q8N9B4 389 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 PPFIBP2Q8ND30 876 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 NETO1Q8TDF5 533 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 PHF21BQ96EK2 531 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 CDC6Q99741 560 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 TMEM79Q9BSE2 394 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 ATG10Q9H0Y0 220 aa23.48■■□□□ 1.35
HMGA2-201ENST00000354636 B4GAT1O43505 415 aa23.47■■□□□ 1.35
HMGA2-201ENST00000354636 UBXN7O94888 489 aa23.47■■□□□ 1.35
HMGA2-201ENST00000354636 ACP1P24666 158 aa23.47■■□□□ 1.35
HMGA2-201ENST00000354636 PPP2R2AP63151 447 aa23.47■■□□□ 1.35
HMGA2-201ENST00000354636 PCLAFQ15004 111 aa23.47■■□□□ 1.35
HMGA2-201ENST00000354636 ADGRF3Q8IZF5 1079 aa23.47■■□□□ 1.35
HMGA2-201ENST00000354636 C2orf73Q8N5S3 287 aaPredicted RBP23.47■■□□□ 1.35
HMGA2-201ENST00000354636 PTGR2Q8N8N7 351 aaPredicted RBP23.47■■□□□ 1.35
HMGA2-201ENST00000354636 Q8N9G6 341 aaPredicted RBP23.47■■□□□ 1.35
HMGA2-201ENST00000354636 OR56A3Q8NH54 315 aa23.47■■□□□ 1.35
HMGA2-201ENST00000354636 IFI44Q8TCB0 444 aa23.47■■□□□ 1.35
HMGA2-201ENST00000354636 KCNK4Q9NYG8 393 aa23.47■■□□□ 1.35
HMGA2-201ENST00000354636 WWOXQ9NZC7 414 aa23.47■■□□□ 1.35
HMGA2-201ENST00000354636 OGFRQ9NZT2 677 aa23.47■■□□□ 1.35
HMGA2-201ENST00000354636 GVINP1Q7Z2Y8 2422 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 IGHV1OR21-1A0A087WYE8 117 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 STX16-NPEPL1H3BU86 382 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 BTN3A3O00478 584 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 STX16O14662 325 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 IPO13O94829 963 aaKnown RBP23.46■■□□□ 1.35
HMGA2-201ENST00000354636 SLC6A12P48065 614 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 AGTR2P50052 363 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 OR1D5P58170 312 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 NAE1Q13564 534 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 PTCHD3Q3KNS1 767 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 FBXO48Q5FWF7 155 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 SPRED1Q7Z699 444 aa23.46■■□□□ 1.35
HMGA2-201ENST00000354636 SLC22A9Q8IVM8 553 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms