RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 PROKR1Q8TCW9 393 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 FAM129BQ96TA1 746 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 LPIN3Q9BQK8 851 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 MRPL4Q9BYD3 311 aaKnown RBP12.95□□□□□ -0.34
IFT88-202ENST00000351808 C3orf14Q9HBI5 128 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 TRHDEQ9UKU6 1024 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 RIMKLBQ9ULI2 386 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 PMPCBO75439 489 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 CRCPO75575 148 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 ITGB3P05106 788 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 STSP08842 583 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 SLC10A3P09131 477 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 NUDT6P53370 316 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 POLR2GP62487 172 aaKnown RBP eCLIP12.95□□□□□ -0.34
IFT88-202ENST00000351808 KCNC3Q14003 757 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 VEPH1Q14D04 833 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 GRIK4Q16099 956 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 LEXMQ3ZCV2 418 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 PPP1R26Q5T8A7 1209 aaPredicted RBP12.95□□□□□ -0.34
IFT88-202ENST00000351808 SAXO2Q658L1 398 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 RGMBQ6NW40 437 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 SHQ1Q6PI26 577 aaKnown RBP12.95□□□□□ -0.34
IFT88-202ENST00000351808 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 SPATA19Q7Z5L4 167 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 ENTHD1Q8IYW4 607 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 OR52K2Q8NGK3 314 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 RAET1EQ8TD07 263 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 SH3RF2Q8TEC5 729 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 CENPIQ92674 756 aaPredicted RBP12.95□□□□□ -0.34
IFT88-202ENST00000351808 HYLS1Q96M11 299 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 BARHL1Q9BZE3 327 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 ELOVL6Q9H5J4 265 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 IL20Q9NYY1 176 aa12.95□□□□□ -0.34
IFT88-202ENST00000351808 FAM234BA2RU67 622 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 ERI2A8K979 691 aaKnown RBP12.94□□□□□ -0.34
IFT88-202ENST00000351808 CXCR6O00574 342 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 RFPL3O75679 317 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 VIPP01282 170 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 CCNCP24863 283 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 RPS19P39019 145 aaKnown RBP12.94□□□□□ -0.34
IFT88-202ENST00000351808 CRKP46108 304 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 RPP38P78345 283 aaKnown RBP12.94□□□□□ -0.34
IFT88-202ENST00000351808 PFKFB4Q16877 469 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 HKDC1Q2TB90 917 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 TOR1AIP1Q5JTV8 583 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 CELF3Q5SZQ8 465 aaKnown RBP12.94□□□□□ -0.34
IFT88-202ENST00000351808 FAM126BQ8IXS8 530 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 C1orf127Q8N9H9 656 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 C2CD4AQ8NCU7 369 aaPredicted RBP12.94□□□□□ -0.34
IFT88-202ENST00000351808 TTPALQ9BTX7 342 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 C11orf84Q9BUA3 381 aaPredicted RBP12.94□□□□□ -0.34
IFT88-202ENST00000351808 VAPAQ9P0L0 249 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 ENOPH1Q9UHY7 261 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 ERVW-1Q9UQF0 538 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 MIA3Q5JRA6 1907 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 DIRAS1O95057 198 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 ALDH1A1P00352 501 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 TPMTP51580 245 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 PRKG2Q13237 762 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 GRK1Q15835 563 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 KDM4DQ6B0I6 523 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 KLHL17Q6TDP4 642 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 HHIPL2Q6UWX4 724 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 Q6ZPB1 254 aaPredicted RBP12.94□□□□□ -0.34
IFT88-202ENST00000351808 GDPD1Q8N9F7 314 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 ZNF548Q8NEK5 533 aaPredicted RBP12.94□□□□□ -0.34
IFT88-202ENST00000351808 MRGPRX2Q96LB1 330 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 CNPPD1Q9BV87 410 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 C1QTNF6Q9BXI9 259 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 IKZF5Q9H5V7 419 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 EXOSC4Q9NPD3 245 aaKnown RBP12.94□□□□□ -0.34
IFT88-202ENST00000351808 FZD10Q9ULW2 581 aa12.94□□□□□ -0.34
IFT88-202ENST00000351808 WDR81Q562E7 1941 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 UBA6A0AVT1 1052 aaPredicted RBP12.93□□□□□ -0.34
IFT88-202ENST00000351808 ASB14A6NK59 587 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 H3BM21 787 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 MYL12BO14950 172 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 PDE9AO76083 593 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 NPPAP01160 153 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 MYL12AP19105 171 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 SSTR4P31391 388 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 ARL2P36404 184 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 KCNQ1P51787 676 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 CAPSQ13938 189 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 ZNF273Q14593 569 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 PCBP1Q15365 356 aaKnown RBP eCLIP12.93□□□□□ -0.34
IFT88-202ENST00000351808 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.93□□□□□ -0.34
IFT88-202ENST00000351808 KIAA1614Q5VZ46 1190 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 ANKRD54Q6NXT1 300 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 ZNF782Q6ZMW2 699 aaPredicted RBP12.93□□□□□ -0.34
IFT88-202ENST00000351808 HDDC2Q7Z4H3 204 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 ZFAND4Q86XD8 727 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 TMEM192Q8IY95 271 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 DPP10Q8N608 796 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 SPATA22Q8NHS9 363 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 KLHL6Q8WZ60 621 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 GGHQ92820 318 aa12.93□□□□□ -0.34
IFT88-202ENST00000351808 B3GALT6Q96L58 329 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms