RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 FAM83DQ9H4H8 585 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 BTNL10A8MVZ5 291 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 FGF1P05230 155 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 CD48P09326 243 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 PEPDP12955 493 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 AP2S1P53680 142 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 DSC2Q02487 901 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 GBE1Q04446 702 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 RGS1Q08116 209 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 FSTL1Q12841 308 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 CBX2Q14781 532 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 ULK3Q6PHR2 472 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 LCLAT1Q6UWP7 414 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 GPR180Q86V85 440 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 FOXRED2Q8IWF2 684 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 CLEC4DQ8WXI8 215 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 ARNTL2Q8WYA1 636 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 NELL1Q92832 810 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 CENPNQ96H22 339 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SCLYQ96I15 445 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 TCF25Q9BQ70 676 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SLC17A7Q9P2U7 560 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 PRKAB1Q9Y478 270 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 BCLAF3A2AJT9 711 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 ZNF701M0R085 212 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 CHP2O43745 196 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 LYPLA2O95372 231 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 CST1P01037 141 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 APODP05090 189 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SNHG28P0DPA3 235 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 ARL2P36404 184 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SNRPD2P62316 118 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 MTAPQ13126 283 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 DSG2Q14126 1118 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 BATFQ16520 125 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 FUT10Q6P4F1 479 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 ZNF773Q6PK81 442 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 RBFAQ8N0V3 343 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 PTERQ96BW5 349 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 PCED1BQ96HM7 432 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 RBM4BQ9BQ04 359 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 RBM4Q9BWF3 364 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SLC7A8Q9UHI5 535 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 OR6C65A6NJZ3 312 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SLC28A1O00337 649 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 DUSP11O75319 330 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 OTCP00480 354 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 TACR2P21452 398 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 LMO2P25791 158 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SRSF11Q05519 484 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 AGAP7PQ5VUJ5 663 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 LIPMQ5VYY2 423 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 ZNF549Q6P9A3 640 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 SPESP1Q6UW49 350 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 OR4A15Q8NGL6 344 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 AARSD1Q9BTE6 412 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 TGIF2Q9GZN2 237 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 ABCG4Q9H172 646 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 LHX5Q9H2C1 402 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 MMP27Q9H306 513 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 IL20Q9NYY1 176 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 TMEM216Q9P0N5 145 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 FCF1Q9Y324 198 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 VWA7Q9Y334 891 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 PCDHA2Q9Y5H9 948 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 RAI2Q9Y5P3 530 aa10.89□□□□□ -0.67
SMARCE1-202ENST00000348513 TCRBV7S2A1N4TA0A589 114 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 FSCN2O14926 492 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 TP73O15350 636 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 PDGFAP04085 211 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 SLC3A1Q07837 685 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 CPA6Q8N4T0 437 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 ARL14EPQ8N8R7 260 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 KLHL6Q8WZ60 621 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 SLC30A2Q9BRI3 323 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 REEP4Q9H6H4 257 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 C12orf10Q9HB07 376 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 NKIRAS2Q9NYR9 191 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 IFT80Q9P2H3 777 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 DEC1Q9P2X7 70 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 TESMINQ9Y4I5 508 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 MAFBQ9Y5Q3 323 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 C2orf71A6NGG8 1288 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 LCMT2O60294 686 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 ANGPTL1O95841 491 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 PBX3P40426 434 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 ELP6Q0PNE2 266 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 MPPE1Q53F39 396 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 ZNF852Q6ZMS4 543 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 ADAMTSL2Q86TH1 951 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 SLC51AQ86UW1 340 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 PDZD9Q8IXQ8 264 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 SCML4Q8N228 414 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 HDDC3Q8N4P3 179 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 OR14C36Q8NHC7 312 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 CPT1BQ92523 772 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 PANX1Q96RD7 426 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 NMUR1Q9HB89 426 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 OSER1Q9NX31 292 aa10.88□□□□□ -0.67
SMARCE1-202ENST00000348513 GLYATL1P3A0A0U1RQE8 302 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms