RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ATG10Q9H0Y0 220 aa26.26■■□□□ 1.79
SSBP4-202ENST00000348495 DNAH14Q0VDD8 3507 aa26.26■■□□□ 1.79
SSBP4-202ENST00000348495 NPHS1O60500 1241 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 SNNO75324 88 aaPredicted RBP26.25■■□□□ 1.79
SSBP4-202ENST00000348495 HSD17B2P37059 387 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 CCT8P50990 548 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 PNLIPRP1P54315 467 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 STX3Q13277 289 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 C6orf132Q5T0Z8 1188 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 ATG16L1Q676U5 607 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 ANKS6Q68DC2 871 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 FRMD7Q6ZUT3 714 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 SLC9B2Q86UD5 537 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 GPR156Q8NFN8 814 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 OR2I1PQ8NGU4 316 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 MAPK15Q8TD08 544 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 CNDP1Q96KN2 507 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 PITPNM3Q9BZ71 974 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 ICKQ9UPZ9 632 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 TMEM114B3SHH9 223 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 E7ENX8 843 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 STK16O75716 305 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 SUPT7LO94864 414 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 VIPP01282 170 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 PKLRP30613 574 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 FASLGP48023 281 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 RAB28P51157 221 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 NAA20P61599 178 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 TAP2Q03519 686 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 RPS27LQ71UM5 84 aaKnown RBP26.25■■□□□ 1.79
SSBP4-202ENST00000348495 TRIM48Q8IWZ4 208 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 ARL14Q8N4G2 192 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 HMGCLL1Q8TB92 370 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 NSUN5Q96P11 429 aaKnown RBP26.25■■□□□ 1.79
SSBP4-202ENST00000348495 C20orf27Q9GZN8 174 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 LNPEPQ9UIQ6 1025 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 GMEB2Q9UKD1 530 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 DMDP11532 3685 aa26.25■■□□□ 1.79
SSBP4-202ENST00000348495 LSP1P33241 339 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 SERPINB5P36952 375 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 MAZP56270 477 aaKnown RBP26.24■■□□□ 1.79
SSBP4-202ENST00000348495 RCN2Q14257 317 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 GPR18Q14330 331 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 TUBB8Q3ZCM7 444 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 CFAP157Q5JU67 520 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.24■■□□□ 1.79
SSBP4-202ENST00000348495 LRRC70Q7Z2Q7 622 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 GATAD2AQ86YP4 633 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 AVL9Q8NBF6 648 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 PPFIBP2Q8ND30 876 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 PYCR2Q96C36 320 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 RAB11FIP5Q9BXF6 653 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 IRF2BPLQ9H1B7 796 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 ZNF395Q9H8N7 513 aaPredicted RBP26.24■■□□□ 1.79
SSBP4-202ENST00000348495 ZBTB26Q9HCK0 441 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 NLGN3Q9NZ94 848 aa26.24■■□□□ 1.79
SSBP4-202ENST00000348495 TCP11X1B4DZS4 312 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 K7EPI3 171 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 ITM2AO43736 263 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 CCR10P46092 362 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 GNGT1P63211 74 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 NAE1Q13564 534 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 FASTKQ14296 549 aaKnown RBP26.23■■□□□ 1.79
SSBP4-202ENST00000348495 RBM12BQ8IXT5 1001 aaKnown RBP26.23■■□□□ 1.79
SSBP4-202ENST00000348495 SYTL1Q8IYJ3 562 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 LSMEM2Q8N112 164 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 LINC01555Q8NAE3 123 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 ATOH1Q92858 354 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-202ENST00000348495 ZNF317Q96PQ6 595 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-202ENST00000348495 TRMOQ9BU70 441 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 SGPP1Q9BX95 441 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 SLC32A1Q9H598 525 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 INTS7Q9NVH2 962 aaKnown RBP26.23■■□□□ 1.79
SSBP4-202ENST00000348495 MYO15AQ9UKN7 3530 aa26.23■■□□□ 1.79
SSBP4-202ENST00000348495 PCDHGA12O60330 932 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 KDM1AO60341 852 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 NBL1P41271 181 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 SLC1A6P48664 564 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 CDH13P55290 713 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 ABCE1P61221 599 aaKnown RBP26.22■■□□□ 1.79
SSBP4-202ENST00000348495 OCRLQ01968 901 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 HHEXQ03014 270 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 LMNTD1Q8N9Z9 388 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 GTPBP2Q9BX10 602 aaKnown RBP26.22■■□□□ 1.79
SSBP4-202ENST00000348495 TWSG1Q9GZX9 223 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 XKR8Q9H6D3 395 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 THAP1Q9NVV9 213 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 OPTCQ9UBM4 332 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 ARID1BQ8NFD5 2236 aaPredicted RBP26.22■■□□□ 1.79
SSBP4-202ENST00000348495 CCNT2O60583 730 aaKnown RBP26.22■■□□□ 1.79
SSBP4-202ENST00000348495 SHOX2O60902 331 aaPredicted RBP26.22■■□□□ 1.79
SSBP4-202ENST00000348495 ZNF806P0C7X5 589 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 TBPL1P62380 186 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 CLCQ05315 142 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 GALNT1Q10472 559 aaPredicted RBP26.22■■□□□ 1.79
SSBP4-202ENST00000348495 C14orf28Q4W4Y0 310 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 ARL13AQ5H913 290 aaPredicted RBP26.22■■□□□ 1.79
SSBP4-202ENST00000348495 GOLGA7Q7Z5G4 137 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 RAB42Q8N4Z0 105 aa26.22■■□□□ 1.79
SSBP4-202ENST00000348495 MINDY1Q8N5J2 469 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms