RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 FAM171BQ6P995 826 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 FBXL19Q6PCT2 694 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SNX29P2Q8IUI4 249 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 CADM2Q8N3J6 435 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 CCDC120Q96HB5 630 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SNX27Q96L92 541 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 TBX5Q99593 518 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 CCDC32Q9BV29 185 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SPATA31D1Q6ZQQ2 1576 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 DAPL1A0PJW8 107 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 C5orf51A6NDU8 294 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 IQCF5A8MTL0 148 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 PRODHO43272 600 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 PROZP22891 400 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 DGKEP52429 567 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 CASP9P55211 416 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 HNRNPDQ14103 355 aaKnown RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 NFE2L1Q14494 772 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 CAND1Q86VP6 1230 aaKnown RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 YAF2Q8IY57 180 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 OR7G1Q8NGA0 311 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 GPR22Q99680 433 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SPATA9Q9BWV2 254 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 ZNF350Q9GZX5 532 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 MKRN2Q9H000 416 aaKnown RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SLC25A51Q9H1U9 297 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 ZDHHC6Q9H6R6 413 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 MIOSQ9NXC5 875 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 CKLFQ9UBR5 152 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 HACL1Q9UJ83 578 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 FZD10Q9ULW2 581 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 C1orf167Q5SNV9 1468 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 ERCC6L2Q5T890 1561 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 HCN1O60741 890 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SLURP2P0DP57 97 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 POLR2LP62875 67 aaKnown RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 ZNF782Q6ZMW2 699 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 IQCF2Q8IXL9 164 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 LRRC52Q8N7C0 313 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 OR10T2Q8NGX3 314 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 C1orf216Q8TAB5 229 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 TSEN15Q8WW01 171 aaKnown RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 DNAJA4Q8WW22 397 aaPredicted RBP11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SIGLEC10Q96LC7 697 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 HYLS1Q96M11 299 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 LMAN2LQ9H0V9 348 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 MARK1Q9P0L2 795 aa11.86□□□□□ -0.51
COL12A1-202ENST00000345356 SEPT4O43236 478 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 KIAA0513O60268 411 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ATE1O95260 518 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 LRG1P02750 347 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 AHSGP02765 367 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 CHRNB1P11230 501 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 WEE1P30291 646 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 RFC2P35250 354 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 EIF5AP63241 154 aaKnown RBP11.85□□□□□ -0.51
COL12A1-202ENST00000345356 OGDHQ02218 1023 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ST3GAL4Q11206 333 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 GRB14Q14449 540 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 DPYSL2Q16555 572 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 SMARCD3Q6STE5 483 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 NOXA1Q86UR1 476 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 SPPL2BQ8TCT7 592 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 SLC39A8Q9C0K1 460 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 TM9SF3Q9HD45 589 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 BRD7Q9NPI1 651 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 FAM118AQ9NWS6 357 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 TRPS1Q9UHF7 1281 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 CLIC1O00299 241 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 SLC1A7O00341 560 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 MATN3O15232 486 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 MSI1O43347 362 aaKnown RBP11.85□□□□□ -0.51
COL12A1-202ENST00000345356 OPN1SWP03999 348 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 SNAPC2Q13487 334 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 PTGES3Q15185 160 aaKnown RBP11.85□□□□□ -0.51
COL12A1-202ENST00000345356 Q8N402 240 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 CHST4Q8NCG5 386 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 DENND6BQ8NEG7 585 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 NDNFQ8TB73 568 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 CCDC107Q8WV48 283 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 SDHDO14521 159 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 VNN1O95497 513 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 HLA-DPB1P04440 258 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 TFAP2AP05549 437 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 SNHG28P0DPA3 235 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ENGP17813 658 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 RYKP34925 604 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ATP4BP51164 291 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 AFF1P51825 1210 aaKnown RBP11.85□□□□□ -0.51
COL12A1-202ENST00000345356 HMGCS1Q01581 520 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 SLC25A11Q02978 314 aaKnown RBP11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ZFP90Q8TF47 636 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 DHRS1Q96LJ7 313 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 RSPH9Q9H1X1 276 aaPredicted RBP11.85□□□□□ -0.51
COL12A1-202ENST00000345356 OR51V1Q9H2C8 321 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 RC3H2Q9HBD1 1191 aaKnown RBP11.85□□□□□ -0.51
COL12A1-202ENST00000345356 EQTNQ9NQ60 294 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 GPN3Q9UHW5 284 aaPredicted RBP11.85□□□□□ -0.51
COL12A1-202ENST00000345356 TLR5O60602 858 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms