RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 NETO1Q8TDF5 533 aa20.86■□□□□ 0.93
CCDC38-201ENST00000344280 C12orf43Q96C57 262 aaKnown RBP20.86■□□□□ 0.93
CCDC38-201ENST00000344280 UGT2B28Q9BY64 529 aa20.86■□□□□ 0.93
CCDC38-201ENST00000344280 ATG10Q9H0Y0 220 aa20.86■□□□□ 0.93
CCDC38-201ENST00000344280 FAM8A1Q9UBU6 413 aa20.86■□□□□ 0.93
CCDC38-201ENST00000344280 UPK3BL1B0FP48 263 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 UPK3BL2E5RIL1 263 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 NEDD8-MDP1E9PL57 170 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 H0YAE9 185 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 THRBP10828 461 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 SDC1P18827 310 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 PTPN6P29350 595 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 SLC6A12P48065 614 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 ESRRGP62508 458 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 RAB39AQ14964 217 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 PON2Q15165 354 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 ZDHHC13Q8IUH4 622 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 PLPP6Q8IY26 295 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 NCLNQ969V3 563 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 POLR1BQ9H9Y6 1135 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 GPRC5BQ9NZH0 403 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 IFT80Q9P2H3 777 aaPredicted RBP20.85■□□□□ 0.93
CCDC38-201ENST00000344280 G3V2T6 193 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 CCL16O15467 120 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 GZMMP51124 257 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 CLDN8P56748 225 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 SLC14A1Q13336 389 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 KCTD8Q6ZWB6 473 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 ZNF551Q7Z340 670 aaPredicted RBP20.85■□□□□ 0.93
CCDC38-201ENST00000344280 TMEM179BQ7Z7N9 219 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 GPR180Q86V85 440 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 MICU2Q8IYU8 434 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 GAB3Q8WWW8 586 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 TCEAL4Q96EI5 215 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 CPEB1Q9BZB8 566 aaKnown RBP20.85■□□□□ 0.93
CCDC38-201ENST00000344280 ZBP1Q9H171 429 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 TOR3AQ9H497 397 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 CXorf21Q9HAI6 301 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 TMEM39AQ9NV64 488 aa20.85■□□□□ 0.93
CCDC38-201ENST00000344280 NUAK1O60285 661 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 FGF18O76093 207 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 POP4O95707 220 aaKnown RBP20.84■□□□□ 0.93
CCDC38-201ENST00000344280 MYCLP1P12525 358 aaPredicted RBP20.84■□□□□ 0.93
CCDC38-201ENST00000344280 ATP1B2P14415 290 aaPredicted RBP20.84■□□□□ 0.93
CCDC38-201ENST00000344280 PGS1Q32NB8 556 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 CCNYL2Q5T2Q4 361 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 LRRC70Q7Z2Q7 622 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 EGFL6Q8IUX8 553 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 SGCDQ92629 289 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 APOLD1Q96LR9 279 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 CPPED1Q9BRF8 314 aaPredicted RBP20.84■□□□□ 0.93
CCDC38-201ENST00000344280 NAA50Q9GZZ1 169 aaKnown RBP20.84■□□□□ 0.93
CCDC38-201ENST00000344280 TIMMDC1Q9NPL8 285 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 PKD2L2Q9NZM6 624 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 ATXN10Q9UBB4 475 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 TMEM202A6NGA9 273 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 CREG1O75629 220 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 CCL5P13501 91 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 HOXB9P17482 250 aaPredicted RBP20.84■□□□□ 0.93
CCDC38-201ENST00000344280 S100A3P33764 101 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 PIGAP37287 484 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 WDR5P61964 334 aaKnown RBP20.84■□□□□ 0.93
CCDC38-201ENST00000344280 NEDD8Q15843 81 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 CALHM3Q86XJ0 350 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 GALNT13Q8IUC8 556 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 LEMD2Q8NC56 503 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 FOXJ1Q92949 421 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 DCUN1D5Q9BTE7 237 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.84■□□□□ 0.93
CCDC38-201ENST00000344280 DCAF13Q9NV06 445 aaKnown RBP20.84■□□□□ 0.93
CCDC38-201ENST00000344280 KLHL42Q9P2K6 505 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 DNAJB9Q9UBS3 223 aa20.84■□□□□ 0.93
CCDC38-201ENST00000344280 MYO7AQ13402 2215 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 GRM6O15303 877 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 SGTAO43765 313 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 SERPINA1P01009 418 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 C8GP07360 202 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 HIST1H2AGP0C0S8 130 aaPredicted RBP20.83■□□□□ 0.93
CCDC38-201ENST00000344280 CSF2RAP15509 400 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 HIST1H2ADP20671 130 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 PRKACGP22612 351 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 NRIP1P48552 1158 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 LRIF1Q5T3J3 769 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 GPR107Q5VW38 600 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 LILRA6Q6PI73 481 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 HSD11B1LQ7Z5J1 315 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 GPR149Q86SP6 731 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 OR2A12Q8NGT7 310 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 HIST1H2AHQ96KK5 128 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 TOX2Q96NM4 488 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 HIST1H2AJQ99878 128 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 SH3GL1Q99961 368 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 H2AFJQ9BTM1 129 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 BBS2Q9BXC9 721 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 EBPLQ9BY08 206 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 KCNH6Q9H252 994 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 CIDEBQ9UHD4 219 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 SNX6Q9UNH7 406 aa20.83■□□□□ 0.93
CCDC38-201ENST00000344280 SCELO95171 688 aa20.83■□□□□ 0.92
CCDC38-201ENST00000344280 ATE1O95260 518 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms