RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 OR2L8Q8NGY9 312 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 BRI3BPQ8WY22 251 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SH3YL1Q96HL8 342 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CSPG4P5Q96PW8 444 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 UHRF1Q96T88 793 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SHARPINQ9H0F6 387 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TNFSF13BQ9Y275 285 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ARL5CA6NH57 179 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 MAGEB17A8MXT2 336 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TXNL1O43396 289 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SLC19A2O60779 497 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 DGKIO75912 1065 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 COL6A2P12110 1019 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SLC7A2P52569 658 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 LIMK2P53671 638 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 AMIGO1Q86WK6 493 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 OR52L1Q8NGH7 329 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TTLL2Q9BWV7 592 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ERVMER34-1Q9H9K5 563 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SLC17A3O00476 420 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 HOXB3P14651 431 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PON2Q15165 354 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 C4orf17Q53FE4 359 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 OR5W2Q8NH69 310 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 FOXN4Q96NZ1 517 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 UNC119BA6NIH7 251 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CDC123O75794 336 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RPS9P46781 194 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 DCAF6Q58WW2 860 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GDPD3Q7L5L3 318 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 LAPTM4BQ86VI4 370 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MCOLN2Q8IZK6 566 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GPD1LQ8N335 351 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ZBTB2Q8N680 514 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 BPIFA2Q96DR5 249 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RAB3CQ96E17 227 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KLQ9UEF7 1012 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TRPS1Q9UHF7 1281 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FAM96BQ9Y3D0 163 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 HCN1O60741 890 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ADRB1P08588 477 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ATP1A3P13637 1013 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CHRNB2P17787 502 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MDH2P40926 338 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SLC18A2Q05940 514 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF460Q14592 562 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ZSWIM9Q86XI8 627 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TMEM68Q96MH6 324 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 AUP1Q9Y679 476 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF185O15231 689 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PKMP14618 531 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 HTR3AP46098 478 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RPL23AP62750 156 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RPL6Q02878 288 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SLC10A7Q0GE19 358 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KCNIP4Q6PIL6 250 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 BHLHE22Q8NFJ8 381 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 OR2T11Q8NH01 316 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 HSPBAP1Q96EW2 488 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PHYHIPLQ96FC7 376 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RUSC1Q9BVN2 902 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TP63Q9H3D4 680 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FN3KRPQ9HA64 309 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FAM120CQ9NX05 1096 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ZDHHC8Q9ULC8 765 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MINPP1Q9UNW1 487 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PRH1P02810 166 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GABRA2P47869 451 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NRIP1P48552 1158 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MECP2P51608 486 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ACSM1Q08AH1 577 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GINS1Q14691 196 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GPATCH4Q5T3I0 446 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 OTOAQ7RTW8 1153 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NAXDQ8IW45 347 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TMEM192Q8IY95 271 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 GTF3C2Q8WUA4 911 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TMEM174Q8WUU8 243 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CNTNAP3BQ96NU0 1288 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FCRL4Q96PJ5 515 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 NKX1-2Q9UD57 310 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MPTX1A8MV57 137 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 PRKYO43930 277 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 STXBP1P61764 594 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ATP6AP1LQ52LC2 224 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TCP10LQ8TDR4 215 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MCCC1Q96RQ3 725 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 ACBD6Q9BR61 282 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MVB12BQ9H7P6 319 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RBM7Q9Y580 266 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 A0A1W2PN81 502 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 FAM230AA0A1W2PPH8 454 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 HLA-DPB1P04440 258 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 MZF1P28698 734 aaPredicted RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CHRNA7P36544 502 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 CHRFAM7AQ494W8 412 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 RNASE10Q5GAN6 216 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 KIAA1324Q6UXG2 1013 aaKnown RBP3.69□□□□□ -1.82
SYNE2-202ENST00000344113 SPOCD1Q6ZMY3 1216 aa3.69□□□□□ -1.82
SYNE2-202ENST00000344113 TRABD2AQ86V40 505 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms