RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SETD6Q8TBK2 473 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 OVCA2Q8WZ82 227 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 KLHDC7BQ96G42 594 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 ZNF570Q96NI8 536 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 ING3Q9NXR8 418 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 NCDNQ9UBB6 729 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 KCNK6Q9Y257 313 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 CFL2Q9Y281 166 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 MED1Q15648 1581 aaPredicted RBP14.7□□□□□ -0.06
UBE3B-202ENST00000342494 A0A075B6Q4 140 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 AP2A2O94973 939 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 NADKO95544 446 aaPredicted RBP14.7□□□□□ -0.06
UBE3B-202ENST00000342494 UNGP13051 313 aaPredicted RBP14.7□□□□□ -0.06
UBE3B-202ENST00000342494 BTN3A2P78410 334 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 VLDLRP98155 873 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.7□□□□□ -0.06
UBE3B-202ENST00000342494 LY6G5CQ5SRR4 150 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 PAQR3Q6TCH7 311 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 HM13Q8TCT9 377 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 HAVCR1Q96D42 359 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 C11orf16Q9NQ32 467 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 PCDHGB5Q9Y5G0 923 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 NEURL4Q96JN8 1562 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 LEFTY2O00292 366 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 HYAL2Q12891 473 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 CLNKQ7Z7G1 428 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 OR4E2Q8NGC2 313 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 OR4K17Q8NGC6 315 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 DENND1AQ8TEH3 1009 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 CDKN2AIPNLQ96HQ2 116 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 CDH22Q9UJ99 828 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 ING4Q9UNL4 249 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 A8MUI8 341 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 SLC30A4O14863 429 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 THRBP10828 461 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 KCNE1P15382 129 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 ZNF792Q3KQV3 632 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 ZZZ3Q8IYH5 903 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 COQ8BQ96D53 544 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 SAMD11Q96NU1 681 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 SMOC2Q9H3U7 446 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 CTPS2Q9NRF8 586 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 CREBZFQ9NS37 354 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 FNIP2Q9P278 1114 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 ATXN10Q9UBB4 475 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 MTMR11A4FU01 709 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 CXCR6O00574 342 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 CLEC3AO75596 197 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 LCA5LO95447 670 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 CLDN7O95471 211 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 IL18Q14116 193 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 SIRPB2Q5JXA9 342 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 C22orf39Q6P5X5 142 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 LRRC57Q8N9N7 239 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 ZNF296Q8WUU4 475 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 TFGQ92734 400 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 SMG9Q9H0W8 520 aaKnown RBP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 KLRF1Q9NZS2 232 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 KMOO15229 486 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 TULP3O75386 442 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 ADH1BP00325 375 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 SEPHS1P49903 392 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 IQCHQ86VS3 1027 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 OR10H4Q8NGA5 316 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 ROPN1LQ96C74 230 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 CMTM7Q96FZ5 175 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 CEP295NLQ96MC4 621 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 YIPF4Q9BSR8 244 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 LDAHQ9H6V9 325 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 VPS29Q9UBQ0 182 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 RSL24D1Q9UHA3 163 aaKnown RBP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 SERTAD3Q9UJW9 196 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 WASHC1A8K0Z3 465 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 WASH3PC4AMC7 463 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 LOC110117498-PIK3R3F6TDL0 507 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 J3KR12 359 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 HLA-EP13747 358 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 AP1S2P56377 157 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 PUM1Q14671 1186 aaKnown RBP eCLIP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 DRICH1Q6PGQ1 229 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 WASH2PQ6VEQ5 465 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 ZNF516Q92618 1163 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 LENG8Q96PV6 779 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 KXD1Q9BQD3 176 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 ADGRB2O60241 1585 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 PSMD9O00233 223 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 XIAPP98170 497 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 COL9A3Q14050 684 aaPredicted RBP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 COLEC12Q5KU26 742 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 TMEM110Q86TL2 294 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 ZBTB46Q86UZ6 589 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 RBM15BQ8NDT2 890 aaKnown RBP14.69□□□□□ -0.06
UBE3B-202ENST00000342494 OR6K6Q8NGW6 343 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 CLPTM1LQ96KA5 538 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 SDHAF3Q9NRP4 125 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 UBAP1Q9NZ09 502 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 SNTA1Q13424 505 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 ENPP2Q13822 863 aa14.69□□□□□ -0.06
UBE3B-202ENST00000342494 SLC51AQ86UW1 340 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms