RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 NLGN4XQ8N0W4 816 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 C19orf47Q8N9M1 422 aaKnown RBP18.55■□□□□ 0.56
SYNE4-202ENST00000340477 ZSCAN1Q8NBB4 408 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 NLGN4YQ8NFZ3 816 aaPredicted RBP18.55■□□□□ 0.56
SYNE4-202ENST00000340477 KIAA1143Q96AT1 154 aaPredicted RBP18.55■□□□□ 0.56
SYNE4-202ENST00000340477 FCRL4Q96PJ5 515 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 OR2A14Q96R47 310 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 NRTNQ99748 197 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 MOCS1Q9NZB8 636 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 LHX6Q9UPM6 363 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 MED16Q9Y2X0 877 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 ZBTB14O43829 449 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 PSIP1O75475 530 aaKnown RBP18.54■□□□□ 0.56
SYNE4-202ENST00000340477 SPAG6O75602 509 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 FKBP9O95302 570 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 MT-ND3P03897 115 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 TPBGLP0DKB5 382 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 STX2P32856 288 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 HSD17B2P37059 387 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 CXADRP78310 365 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 GPR19Q15760 415 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 RBM20Q5T481 1227 aaKnown RBP18.54■□□□□ 0.56
SYNE4-202ENST00000340477 HECTD2Q5U5R9 776 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 TRIM73Q86UV7 250 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 DTX1Q86Y01 620 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 ESX1Q8N693 406 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 OR9A1PQ8NGU1 263 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 TCTN2Q96GX1 697 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 VPS39Q96JC1 886 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 PPM1MQ96MI6 270 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 IL17FQ96PD4 163 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 TRAPPC9Q96Q05 1148 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 SLC30A3Q99726 388 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 TSPYL1Q9H0U9 437 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 SPHK1Q9NYA1 384 aa18.54■□□□□ 0.56
SYNE4-202ENST00000340477 TMEM184BQ9Y519 407 aaPredicted RBP18.54■□□□□ 0.56
SYNE4-202ENST00000340477 DSPP15924 2871 aaKnown RBP18.53■□□□□ 0.56
SYNE4-202ENST00000340477 ZZEF1O43149 2961 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 ARHGEF33A8MVX0 844 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 KIAA0754O94854 1291 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 SYF2O95926 243 aaKnown RBP18.53■□□□□ 0.56
SYNE4-202ENST00000340477 PVRP15151 417 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 CYP2A7P20853 494 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 GABRB3P28472 473 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 SSTR1P30872 391 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 MAGEA4P43358 317 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 MAP7Q14244 749 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 GRB7Q14451 532 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 ARHGAP19Q14CB8 494 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 NAA25Q14CX7 972 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 TGIF1Q15583 401 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 SF1Q15637 639 aaKnown RBP18.53■□□□□ 0.56
SYNE4-202ENST00000340477 ZDHHC24Q6UX98 284 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 C3orf62Q6ZUJ4 267 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 UBE2R2Q712K3 238 aaPredicted RBP18.53■□□□□ 0.56
SYNE4-202ENST00000340477 TMEM126BQ8IUX1 230 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 C2orf73Q8N5S3 287 aaPredicted RBP18.53■□□□□ 0.56
SYNE4-202ENST00000340477 NOA1Q8NC60 698 aaKnown RBP18.53■□□□□ 0.56
SYNE4-202ENST00000340477 FBXO15Q8NCQ5 510 aaPredicted RBP18.53■□□□□ 0.56
SYNE4-202ENST00000340477 SEC14L1Q92503 715 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 MENTQ9BUN1 341 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 EFHD1Q9BUP0 239 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 KLHL25Q9H0H3 589 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 PILRAQ9UKJ1 303 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 VWA7Q9Y334 891 aa18.53■□□□□ 0.56
SYNE4-202ENST00000340477 CELSR3Q9NYQ7 3312 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 TMEM150CB9EJG8 249 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 MYO1CO00159 1063 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 C8GP07360 202 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 CCNYL3P0C7X3 344 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 SAT1P21673 171 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 FDXRP22570 491 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 OAS2P29728 719 aaKnown RBP18.52■□□□□ 0.56
SYNE4-202ENST00000340477 SLC12A2P55011 1212 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 CDKN2DP55273 166 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 IL2P60568 153 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 SP140Q13342 867 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 TSTA3Q13630 321 aaPredicted RBP18.52■□□□□ 0.56
SYNE4-202ENST00000340477 C6orf15Q6UXA7 325 aaPredicted RBP18.52■□□□□ 0.56
SYNE4-202ENST00000340477 PIWIL4Q7Z3Z4 852 aaKnown RBP18.52■□□□□ 0.56
SYNE4-202ENST00000340477 CTAGE3PQ8IX95 158 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 LINC01555Q8NAE3 123 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 HMGCLL1Q8TB92 370 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 ASB11Q8WXH4 323 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 NKD1Q969G9 470 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 LINGO1Q96FE5 620 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 SLC7A5P2Q9GIP4 190 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 RHOJQ9H4E5 214 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 IRAK4Q9NWZ3 460 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 SERTAD3Q9UJW9 196 aa18.52■□□□□ 0.56
SYNE4-202ENST00000340477 FAM95CA0A1B0GW59 222 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 TCRBV9S1A1TA0A576 114 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 CPNE3O75131 537 aaKnown RBP18.51■□□□□ 0.55
SYNE4-202ENST00000340477 SCRG1O75711 98 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 DLGAP3O95886 979 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 MSL3P1P0C860 447 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 PEBP1P30086 187 aaKnown RBP18.51■□□□□ 0.55
SYNE4-202ENST00000340477 RPA3P35244 121 aaPredicted RBP18.51■□□□□ 0.55
SYNE4-202ENST00000340477 VAC14Q08AM6 782 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 TRADDQ15628 312 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms