RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 RPS6KA6Q9UK32 745 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 A0A1W2PPM1 405 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 FAM227AF5H4B4 570 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 FHP07954 510 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 STC1P52823 247 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 IRF4Q15306 451 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 RAB43Q86YS6 212 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 OR5M3Q8NGP4 307 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 PPP1R14AQ96A00 147 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 C19orf60Q96EN9 201 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 CXCL16Q9H2A7 254 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 TRPS1Q9UHF7 1281 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 SCOCQ9UIL1 159 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 RUVBL1Q9Y265 456 aaKnown RBP12.51□□□□□ -0.41
LIN54-201ENST00000340417 ACTL7AQ9Y615 435 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 MYH11P35749 1972 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
LIN54-201ENST00000340417 CDH1P12830 882 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 RYKP34925 604 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 DHFR2Q86XF0 187 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 EEF1AKMT1Q8WVE0 214 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 ZBED6CLQ96FA7 236 aaPredicted RBP12.51□□□□□ -0.41
LIN54-201ENST00000340417 HBEGFQ99075 208 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 RAPGEFL1Q9UHV5 662 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 DDX60LQ5H9U9 1706 aaKnown RBP12.51□□□□□ -0.41
LIN54-201ENST00000340417 NFKB2Q00653 900 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 GSTM4Q03013 218 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 TBCELQ5QJ74 424 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 DEF8Q6ZN54 512 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 SLC44A3Q8N4M1 653 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 MAP4K5Q9Y4K4 846 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 USP3Q9Y6I4 520 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 PSMD11O00231 422 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 FCHO1O14526 889 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 ALPPP05187 535 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 RPSAP08865 295 aaKnown RBP12.51□□□□□ -0.41
LIN54-201ENST00000340417 GLULP15104 373 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 IL9P15248 144 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 PTX3P26022 381 aaPredicted RBP12.51□□□□□ -0.41
LIN54-201ENST00000340417 SLC7A1P30825 629 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 ADAM17P78536 824 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 BST1Q10588 318 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 NR1D2Q14995 579 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 EID3Q8N140 333 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 KIF2BQ8N4N8 673 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 POU5F2Q8N7G0 328 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 MECRQ9BV79 373 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 PRSS16Q9NQE7 514 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 SDHAF3Q9NRP4 125 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 CNTN6Q9UQ52 1028 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 CCT8L1PA6NM43 557 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 PCDH7O60245 1069 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 FCGR1AP12314 374 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 DNAJB14Q8TBM8 379 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 BCL7CQ8WUZ0 217 aaPredicted RBP12.51□□□□□ -0.41
LIN54-201ENST00000340417 ZSWIM3Q96MP5 696 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 EXOSC4Q9NPD3 245 aaKnown RBP12.51□□□□□ -0.41
LIN54-201ENST00000340417 SLC39A1Q9NY26 324 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 HAO1Q9UJM8 370 aa12.51□□□□□ -0.41
LIN54-201ENST00000340417 SHISA7A6NL88 538 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 CACNG3O60359 315 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 KERAO60938 352 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 CSNK2A2P19784 350 aaPredicted RBP12.5□□□□□ -0.41
LIN54-201ENST00000340417 SMIM11AP58511 58 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 ADHFE1Q8IWW8 467 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 RBCK1Q9BYM8 510 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 ENOPH1Q9UHY7 261 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 SLC6A14Q9UN76 642 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 A0A1B0GVT2 93 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 HRH2P25021 359 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 IL23RQ5VWK5 629 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 TMIGD1Q6UXZ0 262 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 TTLL10Q6ZVT0 673 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 PLEKHM3Q6ZWE6 761 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 RNF145Q96MT1 663 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 ARRDC1-AS1Q9H2J1 176 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 MRM3Q9HC36 420 aaKnown RBP12.5□□□□□ -0.41
LIN54-201ENST00000340417 MMP17Q9ULZ9 603 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 CA5BQ9Y2D0 317 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 AQP9O43315 295 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 DFNA5O60443 496 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 LYPLA1O75608 230 aaPredicted RBP12.5□□□□□ -0.41
LIN54-201ENST00000340417 TNFRSF8P28908 595 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 EPHA3P29320 983 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 EIF2DP41214 584 aaKnown RBP12.5□□□□□ -0.41
LIN54-201ENST00000340417 FBXO30Q8TB52 745 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 PNPT1Q8TCS8 783 aaKnown RBP12.5□□□□□ -0.41
LIN54-201ENST00000340417 DEFB126Q9BYW3 111 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 CCDC134Q9H6E4 229 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 LRIT1Q9P2V4 623 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 COPG2Q9UBF2 871 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 ZNF180Q9UJW8 692 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 H7BY64 318 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 TMEM63AO94886 807 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 PAPSS2O95340 614 aaPredicted RBP12.5□□□□□ -0.41
LIN54-201ENST00000340417 RAB41Q5JT25 222 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 TRMT10BQ6PF06 316 aaKnown RBP12.5□□□□□ -0.41
LIN54-201ENST00000340417 DPPA4Q7L190 304 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 MRGPRX2Q96LB1 330 aa12.5□□□□□ -0.41
LIN54-201ENST00000340417 PRAP1Q96NZ9 151 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms