RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 ZNF846Q147U1 533 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 CPSF6Q16630 551 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 PRSS36Q5K4E3 855 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 BEND5Q7L4P6 421 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 ADCK1Q86TW2 530 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 CCDC71Q8IV32 467 aaPredicted RBP11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 ZCCHC7Q8N3Z6 543 aaKnown RBP11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 NKAPQ8N5F7 415 aaKnown RBP11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 ATP6V0D2Q8N8Y2 350 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 LEMD2Q8NC56 503 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 PJA1Q8NG27 643 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 UGT2B28Q9BY64 529 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 DPY30Q9C005 99 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 EHD1Q9H4M9 534 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 GPRC5BQ9NZH0 403 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 CDH23Q9H251 3354 aa11.69□□□□□ -0.54
CCDC144CP-201ENST00000340196 TYW5A2RUC4 315 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 C16orf96A6NNT2 1141 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 FFAR2O15552 330 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 ENDOUP21128 410 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 TGM1P22735 817 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 DAPP51397 102 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 CLCN7P51798 805 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 CASP9P55211 416 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 RAB15P59190 212 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 AHSA2Q719I0 299 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 ANKRD13BQ86YJ7 626 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 RGL4Q8IZJ4 473 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 EID3Q8N140 333 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 SIX5Q8N196 739 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 ANKK1Q8NFD2 765 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 RORBQ92753 470 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 SUSD3Q96L08 255 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 RBM4BQ9BQ04 359 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 RBM4Q9BWF3 364 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 CIPCQ9C0C6 399 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 MARCH7Q9H992 704 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 HMG20AQ9NP66 347 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 AFF4Q9UHB7 1163 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 ZNF229Q9UJW7 825 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 SCML2Q9UQR0 700 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 RAI2Q9Y5P3 530 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 UNC80Q8N2C7 3258 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 MYO1DO94832 1006 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 ASGR1P07306 291 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 ELNP15502 786 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 SPNP16150 400 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 IGFBP5P24593 272 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 HTR7P34969 479 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 TUFMP49411 452 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 MAPRE1Q15691 268 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 KCNA10Q16322 511 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 ATXN7L2Q5T6C5 722 aaPredicted RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 ARMC12Q5T9G4 340 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 RSPO2Q6UXX9 243 aaPredicted RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 RNF19BQ6ZMZ0 732 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 GET4Q7L5D6 327 aaPredicted RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 ZNF540Q8NDQ6 660 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 MAGED4Q96JG8 741 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 CNDP2Q96KP4 475 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 TRIM62Q9BVG3 475 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 C8orf4Q9NR00 106 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 SIRT5Q9NXA8 310 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 SCHIP1Q9P0W5 487 aaPredicted RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 ZNF490Q9ULM2 529 aaPredicted RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 C2orf81A6NN90 581 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 PER2O15055 1255 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 STX7O15400 261 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 GABARAPO95166 117 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 GLUD1P00367 558 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 UGT2B4P06133 528 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 IRF1P10914 325 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 ITIH1P19827 911 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 GTF2E2P29084 291 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 NR4A2P43354 598 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 CLCA4Q14CN2 919 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 PARP15Q460N3 678 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 COLEC12Q5KU26 742 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 P2RY8Q86VZ1 359 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 CLIP4Q8N3C7 705 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 PCSK9Q8NBP7 692 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 FAM83FQ8NEG4 500 aaPredicted RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 WBP2Q969T9 261 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 C1QTNF3Q9BXJ4 246 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 KAT8Q9H7Z6 458 aaKnown RBP11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 PALMDQ9NP74 551 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 GKN1Q9NS71 199 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 C3orf18Q9UK00 162 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 PRELID1Q9Y255 219 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 CARD8Q9Y2G2 431 aa11.68□□□□□ -0.54
CCDC144CP-201ENST00000340196 A0A096LPI6 279 aa11.67□□□□□ -0.54
CCDC144CP-201ENST00000340196 ANKRD34BA5PLL1 514 aa11.67□□□□□ -0.54
CCDC144CP-201ENST00000340196 LOC730098B7Z3J9 87 aa11.67□□□□□ -0.54
CCDC144CP-201ENST00000340196 NT5C1B-RDH14C9J2C7 533 aa11.67□□□□□ -0.54
CCDC144CP-201ENST00000340196 ARNTLO00327 626 aa11.67□□□□□ -0.54
CCDC144CP-201ENST00000340196 INSIG1O15503 277 aa11.67□□□□□ -0.54
CCDC144CP-201ENST00000340196 TBX1O43435 398 aa11.67□□□□□ -0.54
CCDC144CP-201ENST00000340196 GJB5O95377 273 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms