RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 PRMT3O60678 531 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 CELF2O95319 508 aaKnown RBP12.34□□□□□ -0.43
DFFB-202ENST00000339350 HLA-DQB2P05538 268 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 FOXA1P55317 472 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 LRRC26Q2I0M4 334 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 FUT11Q495W5 492 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 SV2CQ496J9 727 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 ANKRD39Q53RE8 183 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 CYHR1Q6ZMK1 362 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 PIWIL4Q7Z3Z4 852 aaKnown RBP12.34□□□□□ -0.43
DFFB-202ENST00000339350 BNIPLQ7Z465 357 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 TSPYL5Q86VY4 417 aaPredicted RBP12.34□□□□□ -0.43
DFFB-202ENST00000339350 P2RY8Q86VZ1 359 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 FUNDC1Q8IVP5 155 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 RADILQ96JH8 1075 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 ZNF578Q96N58 590 aaPredicted RBP12.34□□□□□ -0.43
DFFB-202ENST00000339350 PAAF1Q9BRP4 392 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 CCM2LQ9NUG4 571 aaPredicted RBP12.34□□□□□ -0.43
DFFB-202ENST00000339350 BTRCQ9Y297 605 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 HSPB11Q9Y547 144 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 TSC2P49815 1807 aa12.34□□□□□ -0.43
DFFB-202ENST00000339350 ERI2A8K979 691 aaKnown RBP12.33□□□□□ -0.44
DFFB-202ENST00000339350 NME4O00746 187 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 IPO13O94829 963 aaKnown RBP12.33□□□□□ -0.44
DFFB-202ENST00000339350 SFTPCP11686 197 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 AGXTP21549 392 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 ARFIP1P53367 373 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 ERVK-8P63133 956 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 RPP38P78345 283 aaKnown RBP12.33□□□□□ -0.44
DFFB-202ENST00000339350 STARD3Q14849 445 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 MEP1AQ16819 746 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 TECRLQ5HYJ1 363 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 TBPL2Q6SJ96 375 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 USP50Q70EL3 339 aaPredicted RBP12.33□□□□□ -0.44
DFFB-202ENST00000339350 ST8SIA4Q92187 359 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 RBM22Q9NW64 420 aaKnown RBP eCLIP12.33□□□□□ -0.44
DFFB-202ENST00000339350 FLRT1Q9NZU1 646 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 USP22Q9UPT9 525 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 KCTD3Q9Y597 815 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 PDCD11Q14690 1871 aaKnown RBP12.33□□□□□ -0.44
DFFB-202ENST00000339350 SH3D21A4FU49 640 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 MMP3P08254 477 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 ERP29P30040 261 aaKnown RBP12.33□□□□□ -0.44
DFFB-202ENST00000339350 PGFP49763 221 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 ERVFC1P60507 584 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 DAB2P98082 770 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 CACNB2Q08289 660 aaPredicted RBP12.33□□□□□ -0.44
DFFB-202ENST00000339350 RIN1Q13671 783 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 MFSD10Q14728 455 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 LETMD1Q6P1Q0 360 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 PNCKQ6P2M8 343 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 CEP68Q76N32 757 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 OR8H3Q8N146 312 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 SCAMP5Q8TAC9 235 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 EMID1Q96A84 441 aaPredicted RBP12.33□□□□□ -0.44
DFFB-202ENST00000339350 FOPNLQ96NB1 174 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 NSUN5Q96P11 429 aaKnown RBP12.33□□□□□ -0.44
DFFB-202ENST00000339350 SLC39A8Q9C0K1 460 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 MALT1Q9UDY8 824 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 COPS3Q9UNS2 423 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 DERAQ9Y315 318 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 PCDHB3Q9Y5E6 796 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 PCDHGA2Q9Y5H1 932 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 HRH3Q9Y5N1 445 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 ACTL7AQ9Y615 435 aa12.33□□□□□ -0.44
DFFB-202ENST00000339350 NPHS1O60500 1241 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 FCER2P06734 321 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 HTR7P34969 479 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 TPMTP51580 245 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 GRB7Q14451 532 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 ZNF404Q494X3 552 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 TPRG1LQ5T0D9 272 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 SCIMPQ6UWF3 145 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 TMEM207Q6UWW9 146 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 DNAJB14Q8TBM8 379 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 SENP8Q96LD8 212 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 KLHL5Q96PQ7 755 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 ZNF300Q96RE9 604 aaPredicted RBP12.32□□□□□ -0.44
DFFB-202ENST00000339350 SMOC2Q9H3U7 446 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 TLR9Q9NR96 1032 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 TBC1D13Q9NVG8 400 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 CD300AQ9UGN4 299 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 PDE10AQ9Y233 779 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 TP53BP1Q12888 1972 aaPredicted RBP12.32□□□□□ -0.44
DFFB-202ENST00000339350 A0A0J9YYE9 177 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 GLTPD2A6NH11 291 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 CCDC154A6NI56 674 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 SLC22A2O15244 555 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 TREHO43280 583 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 GJB3O75712 270 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 ADORA3P0DMS8 318 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 CDKN2DP55273 166 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 ABRQ12979 859 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 DDR2Q16832 855 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 DBX2Q6ZNG2 339 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 PLCZ1Q86YW0 608 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 UBASH3BQ8TF42 649 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 LGALS12Q96DT0 336 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 TSGA13Q96PP4 275 aa12.32□□□□□ -0.44
DFFB-202ENST00000339350 NODALQ96S42 347 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms